Garra rufa (doctor fish): 141346151
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Entry
141346151 CDS
T11039
Symbol
ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141346151 (ppfia1)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141346151 (ppfia1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Asd-4
Motif
Other DBs
NCBI-GeneID:
141346151
NCBI-ProteinID:
XP_073707166
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Position
11:13949187..14008618
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AA seq
1236 aa
AA seq
DB search
MMCEVMPTISEAEVGSNGGGLGSGSPVQTDSEGHFESLMVSMLEERDRLLDTLRETQENL
CVTQSKLHEISHERDSLQRQLNSALPQEFAALTKEVNMCREQLLEREEEIAELKAERNNT
RLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRER
LRVALERCSMLEEQLTAAHKELAFLKEQNSQRKVIIDGSAEVNHSSDAALNTNGKQRLSD
VSMGAEEDCVRDVELQEAMERQSKELLHMKERVASLSSRVTELEEDLDTARKDLIKSEDI
NSRLQRDLRESLAQKDDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSLVCQV
EEKSRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRVVALTKAEERHGNVEERLRQME
AQLEEKNQELLRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKERMSALEDKNALI
RDLEHTKKLIEEAHHEKEQLLIQIETMRTEHERGRSRSNSLLHHGRSHVSGTPDFRYPVS
VSSAMDSHYSGALVLRRPQKGRVSALRDEPSKVQTLDEQEWDRLQQANVLANVAHAFESD
MDMSDMEDDRDTVFSSMDLLSPAGQADAQTLALMLQEQLDAINNEIRMIQEEKESTAIRA
EEIESRVGSGDDLGGRFRSMTSLPPSFHSSSHADASPPGSGQSTPRRPSRSPSRELDRMG
VMTLPSDLRKHRRKCAQDDKATIRCETSPPSTPSSMRLHKGALHTASHEDIRDIRGTGLQ
DGAGSNPSSSNSSQDSLNKGAKKKSIKSSIGRLFAKKEKGRPNPVGKESPGPALAGTPDG
GSAQDAMTLGKLGGPAEKNRKLQKKHELLEEACRQGLPFAQWDGPTVVVWLELWVGMPAW
YVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTS
SGNVWLTHEEMESLAATPPTEDEEGSWAQTLAYGDMNHEWIGNDWLPSLGLPQYRSYFME
SLVDARMLDHLTKKDLRSQLKMVDSFHRNSFQCGVMCLRRLNYDRKELERRREESQVEVK
DVLVWTNERVVSWIQAIGLKEYAGNLLESGVHGALIALDESFDHNAMALLLQIPTQCTQA
RALLEHEYGRLLSGGTERRLEEDDDKNFRRAPSWRKKFRPKDVRGMSVSSADTLPASFRV
SAGDASSAALLAKKPQLDGSVSVQRLDSATVRTYSC
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagtgaggcggaggtcggcagtaacggaggcggt
ctgggctcgggctctcctgtgcagacggactctgagggccactttgagtctttgatggtg
tctatgctggaggagagagaccgactgctggacacactcagagagacgcaggagaacctg
tgtgtgacgcagagcaaattgcacgagatcagccatgaaagagactcactccagagacag
ctcaacagcgcactgccgcaggaatttgctgctcttacaaaagaagtgaatatgtgtcga
gagcagctgctggagcgagaggaggagattgcagagctgaaagcagaaagaaacaacacg
cgtttgttgctggagcatctggagtgtctggtgtctcgtcatgagcgttctctgagaatg
accgtagtcaagcgccaggctcagtctcccgccggtgtctccagtgaggtcgaggtgctc
aaagcgctcaaatctctctttgagcaccacaaggccctggatgagaaggtgagagagcgt
ctgcgtgtggctctggagagatgcagtatgctggaggaacagctcacggctgctcataaa
gagctggcgtttctcaaagaacagaacagtcagaggaaagtgattattgatggatcagca
gaagtgaatcacagctctgatgcagcattaaacactaatggcaagcagcgcttgtcagac
gtctctatgggtgcagaggaggattgtgtgagggacgtggagctgcaggaggcgatggag
agacagagtaaagagctcttgcacatgaaggagcgtgtggcgtctctcagcagccgtgtc
actgagctggaggaggatctggacacggcccgcaaagacctcatcaagtctgaggacatc
aacagccgcctgcagagagacttacgagagtctctggctcagaaggatgacatggaggag
agaatcaccacgctggagaagcgttacctggcagctcagagagaagccacgtctgtccat
gacctcaacgacaaactggagaatgagatcgccaacaaggactccctggtctgccaggtg
gaggagaagagccggcagctgcaggagcgactggagcttgcggagcagaagctgcagcag
accatgcgcaaggccgagacattgccagaggtggaggcagagctggcacagagggtcgtg
gccctcactaaggcagaggagcgtcatgggaatgtagaggagcgtctcagacagatggaa
gctcagctggaggagaagaaccaggagttgctgagggcccgtcagcgagagaagatgaat
gaagagcacaacaaacgtctgtccgagactgtggacaaactgctgtctgaatccaacgag
aggctgcagctgcacctgaaagagcgcatgtctgcattggaggacaagaacgctctgatc
cgggatctggagcacaccaagaagctcatagaagaggctcatcatgagaaggagcagctg
ctcatccagattgagaccatgaggaccgaacacgagcgtggccgcagtaggagcaactct
ctgctgcatcatgggcgttctcatgtgagtggcacgccagatttcaggtaccctgtgtcc
gtgtcgtcagcgatggacagtcactatagtggtgcgctggtgctcagacgaccacagaag
ggtcgtgtatctgcactgcgagacgagccctcaaaggtgcagacgctagatgaacaggaa
tgggatcggctgcagcaggctaatgttctggctaacgtggctcatgcatttgagagtgac
atggacatgtcagacatggaggacgacagagacacggtcttcagctccatggacctcctt
tctcctgctggacaggcagatgctcagactctcgccctgatgctgcaggagcagctggat
gccattaacaatgagatacggatgatccaggaggaaaaggagagcaccgcaataagagcc
gaggagattgagagccgtgtgggcagtggagatgatctgggcggtcgcttccgctccatg
acatccctcccgccttcgttccacagctcatcccacgctgatgcctcgccgcccggatcg
ggtcaatccacacctcgcaggccatcccgcagccccagccgagagctggatcgcatgggg
gtcatgaccctgcctagcgatttgcggaagcatcgtaggaagtgtgcacaagatgacaaa
gctactatcagatgtgagacgtctcccccatccaccccgtcctccatgagactccataaa
ggagcactgcatactgccagccatgaggacatcagagacatacggggaactgggctgcag
gacggagcgggcagcaatcccagcagcagcaacagcagtcaggactcactcaacaaagga
gccaagaagaagagcatcaagtcctccatcggccggctgtttgcaaagaaagagaagggt
cgtcccaatccggtggggaaggaatctcctggtccagcgctggcaggtacgcctgatgga
ggaagcgcacaggatgccatgacgctcggaaaactgggcggacctgcagagaagaacaga
aaactgcagaagaaacatgaattgctggaggaagcctgtcggcagggtctgcccttcgct
cagtgggatggaccgactgtggtggtgtggcttgagctgtgggtcgggatgcctgcgtgg
tatgtagcagcgtgccgtgccaatgtgaaaagtggtgctatcatgtctgccttgtccgac
accgagattcagcgcgagattggcatcagcaaccctcttcaccgcctcaaactacgcctc
gctattcaggagatcatgtcgcttactagcccgtcagctccacctacctccagaacgtct
tctggaaatgtctggctcacacatgaggagatggagagtttggctgctacgccgcccacg
gaggatgaggagggcagctgggcccagactctggcctacggtgacatgaaccatgaatgg
atcggtaacgactggctgcccagccttggtttacctcaataccgcagctacttcatggag
tcgctggtagacgctcgtatgctggatcatctgaccaaaaaagacctccgcagtcagctc
aaaatggtggacagcttccacaggaacagttttcagtgtggtgtaatgtgtttgagacga
ctcaactatgacaggaaagagcttgagcgaagacgtgaggagtcacaggttgaagtcaaa
gatgtgctggtgtggacgaacgagcgtgtggtcagctggattcaggccatcggactgaag
gagtatgcgggtaatcttcttgagagtggtgtgcacggtgcactcatcgctttggacgag
tcctttgatcacaatgccatggctctgctgctgcaaatccctacacagtgcacacaggca
agggcgttactggagcatgagtatgggcgcctgttatcggggggaacggagaggagacta
gaggaggacgatgacaagaacttccgtcgcgcaccgtcctggcggaaaaagttccggccc
aaggacgtgcgtggaatgagtgtgagctccgctgacacactgcccgccagcttcagggtg
agcgctggagatgcttcctccgccgccctactggccaagaaaccacagctcgatggaagt
gtaagtgttcagcgtctggattcggccacggtcagaacctactcctgctga
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