Garra rufa (doctor fish): 141346526
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Entry
141346526 CDS
T11039
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
grf Garra rufa (doctor fish)
Pathway
grf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141346526 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141346526 (nelfcd)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
141346526 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
141346526
NCBI-ProteinID:
XP_073707512
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All DBs
Position
12:complement(39570811..39585019)
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AA seq
579 aa
AA seq
DB search
MDEEYYSNVGEWEGQDGNMEDGYGDAEADGKVQEDCLQKFSSRDYIMEPTVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQE
EQGGSAMRRIGQEVQKYAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMLSLFKPGAKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVITPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaatactacagcaatgttggagaatgggagggacaagacggcaacatggag
gatggatatggggatgctgaggctgatggaaaagttcaggaggattgtctgcagaaattc
tccagcagagactacatcatggagcccaccgtgtttaacaccctgaaaacgtatttccag
gcaggtggttcacctgagcatgtcatccagctgctctcagagaactattccgctgttgca
cagacggtcaacctactggcggagtggctgattcagatgggtgtggagcccgctcaggtg
caggagcgtgtggaaaatcatttaaagagcctcttgatcaaacactttgaccctcagaaa
gcagattctattttcactgttgagggagagacaccagcatggctggagcagatgatagca
cacacaacatggagagatctgttctacaaactggctgaggctcatccagactgcctgatg
ctcaacttcactgtcaagttaatttcagatgcaggataccaaggagagatcacaagcgtg
tccacagcctgtcaacagttagaggttttctccagagtcctgcgaacctctctcgccaca
ctgctggatggaggagaacagaacctggagaaaaatctccctgagtttgctaagatggtg
tgtcatggagagcacacatacttgttcgctcaggccatgatgtccatcctctctcaggag
gagcagggcggctcagcaatgcgacgaattggacaagaagtacagaaatacgcccatgag
aggggacatgatgccagtcagatcacattagcgttgggcacagctgctgcatatccgcgc
gcatgccaggctcttggtgccatgctttccaaaggggctctgaacccagccgacatcaca
gtcctgttcaagatgttcagtagcatggatccacctcctgtagagctgatccgagttcct
gcctttttggatctgttcatgctgtcgctatttaaacccggagctaaaattaaccaggac
cacaaacacaaatacatccacattttagcatatgctgctagtgttgtggaaacatggaaa
aagaacaagcgtgtgaatataaataaggatgagctgaagtcgacctcaaaggccattgag
acggttcataatctctgctgcaatgagaacaagggagctacagagttagtagcagagctc
agcacgttataccagtgcataaggtttccagtggtagcaatgggagtactgaagtgggtc
gactggacggtgtctgaacctcgttacttccagctacagacagaccacactcctgtccat
ctagcactgctggatgagatcagcacgtgccatcagcttcttcatcctcaggtgttacag
ttgctcatcaaactgtttgaaacagagcactcacagctcgatgtcatggagcagttggag
ctcaagaagactttactggaccgtatggttcacctgttgagtcgaggttatgttcttcca
gtggtcagctacatccgcaaatgtcttgagaaactcaacacagacatttcactcatcaga
tactttgttacagaggtactagatgtgataacacctccatatacctcagacttcgtccag
ctgtttttgcccatcttagaaaacgacagcatagcaggaacaatccgtactgagggagaa
catgaccctgtagctgagttcattgctcactgcaaatccaacttcatcatgatgaactaa
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