Garra rufa (doctor fish): 141346585
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Entry
141346585 CDS
T11039
Symbol
tspeara
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141346585 (tspeara)
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141346585 (tspeara)
Cilium and associated proteins [BR:
grf03037
]
Other cilia and associated proteins
Stereociliary proteins
141346585 (tspeara)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
141346585 (tspeara)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
TS_C
Peptidase_S3
Motif
Other DBs
NCBI-GeneID:
141346585
NCBI-ProteinID:
XP_073707606
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All DBs
Position
12:9437816..9458503
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AA seq
677 aa
AA seq
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MEGQHNLVPSSWLFALQLSLLLLPPMESVTVVPWKPCTDLRPVDLLSRVLPHNGETMSGV
RMVQEGGARGVQFFSPTQAHTFPSSQLFINCPHFPAEFSIVATVKVSHTRIKRNEYLFAV
VKEDVDQLLIGLRFSKEKVHLIYQGSMGRQRLSFKRIRLTDNHWHSIVLAVSGHHATLTL
DCGIPLELIHKQPFPSDLSTNGSRFHIGSRRKWKGLFSGLLRQLVLLPGSDATPRVCPSF
RPSLVELSIPTILSNLPVKSQTNDVLGPPYETEVRVTLGSKPACTAAEQGQLWFDTLKRG
LFLCDGAYWHSMLQEKDRLDYVDDYQDLYTTSETLDIELFQIPSFGLFAAMAHRANKPGS
AIYRWNHGHFQLYQNISTFKAQAWKQFTIGRKIFLAVSNSVGPADGERELSVIYRWSNKR
LKFVRYQTLETHSARDWEAFHINNEAFLAVANHRTENGNHNIDSVVYKWNPGTKIFEVNQ
TISTLGAYDWEFFTVGPYHFLAVANAFDGTSTQTDSSIYIWLGGAFQLFQTIRTFGATDW
EMFQIGNRVFLAVANGHMLCERGPSLYTINSTIYELDMTTKMFLKFQDIVTYSAVDWEFF
SVGDEHFLVVANSYDGSSYSLNSVIYRWQGYEGFVPVHRLPTIGCSDWEFFTSAEGSYLM
YSSAKAPLSKIFKLRIH
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacagcataacttggtgccatcatcgtggctatttgcactgcagttgtctctg
cttcttctgccaccgatggaaagtgtgaccgtagtaccatggaaaccttgtacagatctc
cgtccagtggacctgttgtctcgagtgctgcctcataatggagagactatgtctggggtc
cgtatggtgcaggagggaggtgctcgtggggtccagttcttcagtcctacgcaggcacac
acctttccatcgtctcagctcttcattaactgccctcatttccctgcagaattctccata
gtggccactgtaaaagtgtctcacaccagaataaagaggaatgagtacttgttcgctgtg
gtgaaggaggatgtcgatcaactcctgattggcctgcgtttctctaaagagaaagtccat
ctcatctatcagggctcaatggggaggcagcgtcttagctttaaaagaatccggctcacg
gataaccactggcacagcatagtgttagccgtcagcggtcaccatgccaccctcaccctg
gactgcggcatcccactggaactgatccataaacagccatttccctctgatctcagcacc
aatggctccaggtttcacattggaagtcgaagaaagtggaaaggcctattctctggttta
ctgcgccaactcgtccttttgcctggatcagatgcaacaccacgtgtttgtccctctttc
agaccatcactagttgagctttccatccctacaattctgtcaaacctgcccgtgaaatcc
caaacgaatgacgtcctgggccctccatatgagacggaggtccgtgtcactttgggatct
aaaccagcatgcactgcggcagagcagggacaactctggtttgacactcttaaaagaggc
cttttcttatgtgatggtgcatactggcactctatgctccaagaaaaagaccggctagac
tatgtagatgattaccaggacctctacaccacctcagagacgctggacattgagcttttc
cagattccctcttttgggctgtttgctgctatggctcatcgggccaacaaaccaggatct
gccatctaccgctggaaccacggccatttccagctctaccagaacatcagcacctttaag
gcccaggcatggaagcaattcactatagggaggaagatattcttggcggtgtcaaactcc
gtgggcccggcggatggagagcgagagctgtctgtgatctatagatggagtaataagagg
ctgaagtttgtgcgttatcagaccctggagacgcacagcgctcgtgactgggaggccttt
catattaataatgaagcttttttagctgtggctaatcaccgaacagagaatggcaatcac
aacattgacagcgttgtttataagtggaacccaggcaccaagatatttgaggtgaaccag
accatctcgacattaggagcttacgactgggagtttttcaccgtaggaccctaccacttc
ctagcagtggccaacgcatttgacggcacctccacccaaacagattcatcaatctatatc
tggcttggtggagcctttcagctttttcagactataaggacatttggggctacagactgg
gagatgtttcagattggaaacagagtcttcctagctgttgccaatggacacatgctgtgt
gagagaggaccgagcctctataccatcaactcaactatatatgaacttgatatgacaacc
aagatgttcctcaagttccaagacattgtaacatacagtgcggtggactgggagttcttt
tcggttggagatgagcacttcttggttgtagccaactcttatgatggatcgtcttactct
ttgaacagtgttatatacagatggcagggatatgagggttttgttcctgttcatcgatta
cctactattggatgcagtgactgggagttctttacctcagcagagggttcatacctgatg
tactccagtgccaaagcacctctctccaaaatcttcaagctgagaatccactga
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