Garra rufa (doctor fish): 141346606
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Entry
141346606 CDS
T11039
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00260
Glycine, serine and threonine metabolism
grf00270
Cysteine and methionine metabolism
grf00450
Selenocompound metabolism
grf00670
One carbon pool by folate
grf01100
Metabolic pathways
grf01230
Biosynthesis of amino acids
Module
grf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
141346606
00270 Cysteine and methionine metabolism
141346606
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
141346606
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
141346606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141346606
Enzymes [BR:
grf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
141346606
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141346606
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
141346606
NCBI-ProteinID:
XP_073707634
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Position
12:31163228..31175006
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AA seq
404 aa
AA seq
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MASQMQNNSSAGYQPVFKSFATDAIHVGSEPEQWNSMAVVPPISLSTTFKQQEPGKHAGF
EYSRSGNPTRNCLEKAVAALDGAQYCLAVASGLAATLTITHLFKAGDGILCMNDVYGGTN
RYFRKIAAEVGFEISFADLTKLEEIKAALKPNTKMVWIETPTNPTMKVVDIQGCADIVHE
YNKDIIVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLISLSRDDLYERLK
FLQNALGAVPSPFDCYMCNRGLKTLHLRMKQHFKNALAVAQFLEADPRVDKVIFPGLPSH
PQYELTKRQCTGCPGMITFYIKGKLEHASTFLSSLKLFALAESLGGYESLAEHPAIMTHA
SVSEDERKVLGISDTLVRLSVGLEDEEDIIADLDQALAAAHPKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaaatgcagaacaacagctcagccggctaccagccggtcttcaaatcgttc
gctacagatgcgatccacgttggttcagaaccggagcagtggaactctatggcagtagtg
cctcctatttcattgtctacaacctttaaacaacaggaaccgggcaaacatgcggggttt
gagtacagcaggagtggaaatcccacaagaaactgtcttgagaaagcagttgctgctttg
gacggtgcacaatattgtctcgctgttgcctctggattggctgcaactttgaccatcaca
catctttttaaggctggagatggaattttatgcatgaatgatgtttatggaggaactaac
cggtatttcaggaaaatagctgcggaagttggctttgaaatctcttttgctgacctcacg
aagctagaggagataaaagcagctctgaaaccaaatacaaagatggtatggattgaaacg
cccacaaaccctacaatgaaggttgtggacatccagggctgtgcagatattgttcatgag
tacaacaaggacataattgttgttgtggacaacactttcatgtcagcctacttccagcgc
ccccttgcacttggagcggacatctgcatgtattctgcaacaaaatacatgaatggtcac
agtgatgttgtgatgggactgatttctctcagccgtgatgacctttatgaaagactaaag
tttttgcagaatgctcttggagctgtgccctctccatttgattgttatatgtgcaatcgg
ggtctgaagacactccacctgagaatgaagcagcactttaagaatgcgttggccgtggca
cagtttctggaggctgatccaagagtggacaaagtcatcttccctggtcttccatcccac
cctcagtatgagctgactaagagacagtgcacaggctgtcctgggatgatcactttttac
atcaaagggaaactggagcatgcctcaactttcctcagcagtctaaagttgtttgcactt
gctgaaagtcttggtggttatgagagtctagcagagcacccagcgattatgactcatgct
tcagtgtctgaggatgaaaggaaagtgctgggcatcagtgatacgctcgttcgtctgtct
gtgggcctggaggatgaggaagatattattgcagatcttgaccaagctcttgctgctgca
catccaaaaaagtaa
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