Garra rufa (doctor fish): 141346647
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Entry
141346647 CDS
T11039
Symbol
matn4
Name
(RefSeq) matrilin-4 isoform X1
KO
K19467
matrilin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141346647 (matn4)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
141346647 (matn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
EGF_CA
VWA_2
EGF
EGF_3
hEGF
Matrilin_ccoil
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
141346647
NCBI-ProteinID:
XP_073707677
LinkDB
All DBs
Position
12:41852181..41883988
Genome browser
AA seq
988 aa
AA seq
DB search
MTRALVYISVLIAIIAVTEARPKSAEPKCKSGPVDLVFIIDGSRSVRPHEFETMRKFMID
IIHELDIGLEATRIGVVQYSSQVQNVFSLKAFSKTEQMVKAINQIIPLAQGTMTGLAIRY
SMNVAFSAEEGARPNVPHVAVIVTDGRPQDRVAEVAAAARESGIEIYAVGVARADMTSLR
AMASPPFEDHVFLVESFDLIHQFGLQFQDKLCGMDLCLESDHGCEHICESSPGSYHCLCL
PGYTLNEDGKTCTPIDLCAEEKHDCEQICIASPGSFMCDCNTGYTLNDDKKTCKMIDYCS
FGNDSCEHQCVSVLNGFNCRCNEGYSLNDDLKTCTMIDYCSFGNDSCEHECVSVLQSFYC
ECREGYTLNEDETSCTMIDYCSFGNDSCEHECVSVLNGFNCRCNDGYSLNDDMKTCTMID
YCSFGNDSCEHQCVSVLKGFHCVCNDGYTLNDDKKTCTMIDYCSYGNDSCEHQCVSVLKG
FHCVCNDGYSLNDDKKTCTMIDYCSFGNDSCEHQCVSVLKGFHCVCNDGYSLNDDKKTCT
MIDYCSFGNDSCEHKCVSVLKGFHCICNDGYSLNDDKKTCTMIDYCSFGNDSCQHECVSV
LKGFNCRCNEGYSLNDDLKTCTMIDYCSFGNDSCEHECVSVLKGFHCRCKDGYTLNDDKK
TCTMIDYCSFGNHSCDHHCVSVLNGFFCRCNEGYTLQEDGKTCQSDNLCNTVEHGCEYQC
VSTPGSYHCICPEGHVLQDDGKTCGTCRTSNIDLVLLIDGSKSVRPQNFELVKQFVNQVV
DQLDISPKGTRVGLVQYSSRVRTEFPLSMYQTKEEIKKAVMNVQYMEKGTMTGLALKHMV
ESSFSEADGARPAAKNIPRVGLVFTDGRSQDDIQEWAKKAKEAGITMYAVGVGKAVEDEL
REIASEPVEKHFFYSADFTAISQIAENLKFNVCAAESQGEIEVKDPCACESLVEFQQVTM
STLDQLNQKLSVMTKRLEVLESQLLTRK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtgcgttggtgtacatcagtgtgctaatagccataatagctgtgacggaagcg
aggcctaaatcagctgaaccaaagtgtaaatctggcccggtcgaccttgtgttcatcatc
gacggctcccgcagcgttcgtccccatgagttcgagacgatgcgcaagttcatgatcgac
atcatccacgagctagacatcggcctggaagctacaagaattggtgtggtccaatactct
agtcaagtccagaacgtgttctccctcaaagccttcagcaagactgagcagatggtcaaa
gctatcaaccagatcattccattggcacagggcactatgactggcctggccatccgctat
tccatgaatgtagccttctctgccgaggaaggtgcgcgtcccaacgttccccatgtagcc
gttattgtgacagacggacgccctcaggatcgtgtggctgaagtggcggccgctgcaagg
gagtctgggattgagatctacgccgtcggtgtcgccagagccgatatgacctcactgcgt
gctatggcgtcaccaccgtttgaggatcacgtgttcctggtggagagctttgacctcatt
caccagttcgggcttcagttccaagacaagctttgtggaatggacttgtgtctggaatcg
gatcacggctgtgagcacatctgcgagagttcgccaggctcctaccactgtctgtgtctg
cctggatacacgctcaacgaggatggcaagacctgcacacccattgatctatgtgctgaa
gagaagcatgattgtgagcagatctgtatcgcttcacccgggtcattcatgtgtgactgt
aacacaggatacacactcaacgacgacaagaaaacatgcaaaatgatcgactactgctca
tttggaaatgacagctgcgagcatcaatgtgtgagtgtgctcaatggctttaattgtcgc
tgtaacgaaggatactcactcaacgatgacctgaaaacctgcacaatgatcgactactgc
tcatttgggaatgacagctgtgagcacgaatgtgtgagcgtgcttcagagcttttattgt
gaatgccgtgaaggatacacactcaatgaggacgaaacatcgtgcacaatgatcgactac
tgctcatttgggaatgatagctgcgagcacgagtgtgtgagtgtgctcaatggctttaac
tgccgttgtaacgatggatactcactcaacgatgacatgaagacctgtacaatgattgat
tactgctcatttgggaatgatagctgcgagcaccagtgtgtgagtgtcctgaaaggcttt
cactgcgtttgtaatgatggatacacactcaacgatgacaagaagacctgcacaatgatc
gattactgctcatatgggaatgatagctgtgagcaccagtgtgtgagtgtcctgaaaggc
tttcactgcgtttgtaacgatggatactcactcaacgatgacaagaagacttgtacaatg
atcgattactgctcatttgggaatgatagctgcgagcaccagtgtgtgagtgtcctgaaa
ggctttcactgcgtttgtaatgatggatactcactcaacgatgacaagaagacttgcaca
atgatcgattactgctcatttgggaatgatagctgcgagcacaagtgtgtgagtgtcctg
aaaggctttcactgcatttgtaacgatggatactcactcaacgatgataagaagacctgc
acaatgatcgactactgctcatttgggaatgatagctgccagcacgagtgtgtgagtgtg
ctcaaaggctttaactgtcgctgtaatgaaggatattcgctcaatgacgacctgaagacc
tgcacaatgatcgattactgctcatttgggaatgatagctgcgagcacgagtgtgtgagt
gtgctgaaaggctttcactgccgttgtaaggacggatacaccctcaatgatgacaagaaa
acctgcacaatgattgattactgttcatttgggaatcacagttgtgatcatcactgtgtt
agtgtgctcaatggtttcttctgtcgctgcaatgagggatacactcttcaggaggacgga
aagacctgccagtcggataacttgtgtaatacagtcgaacatggttgtgaataccagtgt
gtgagcactccaggatcataccactgtatatgtcctgagggccatgtactacaggatgat
ggcaaaacctgtggaacctgtcgaacctccaacatcgacctggtcctcctcatcgacggt
tccaagagcgttcggccacagaatttcgagcttgtcaagcagtttgttaaccaggtggtg
gatcagctggacatctcccctaaaggaacacgcgtgggtctcgtccagtactcaagccga
gtgcggacagagtttccgctcagcatgtatcagacaaaagaagagatcaaaaaggctgtg
atgaatgtgcagtacatggagaaagggaccatgacaggtttggctctcaaacacatggtg
gagagcagcttctcggaggctgacggagcgcgtcctgctgcgaagaacatcccacgggtt
ggcctggtttttactgatgggcgttcacaggatgatattcaggagtgggccaagaaggcc
aaggaagcaggtatcaccatgtatgctgttggtgtgggtaaagctgtggaggatgagctg
agagagattgcctctgagcctgtggaaaaacacttcttctactccgccgacttcactgcc
atcagccagatcgctgaaaacctcaaattcaatgtctgcgcagctgagagtcaaggagag
atcgaggttaaggacccctgcgcttgtgaaagtcttgtggagttccagcaggttacgatg
tccaccctagaccagctcaaccaaaagctgtcagttatgaccaagcgattggaagttctg
gagagccagctgctcacaagaaaatga
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