Garra rufa (doctor fish): 141346685
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Entry
141346685 CDS
T11039
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141346685 (sec16b)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
141346685 (sec16b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
141346685
NCBI-ProteinID:
XP_073707723
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All DBs
Position
12:20143393..20163752
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AA seq
951 aa
AA seq
DB search
MDPRGQGWHTPGYQYQSSERDDHYRSSHQTPYYYPPTDPRGRDRQWPHVDPRYGNYMASP
PPKPEYIPGYSNAYASNQPVHFRPHSRQEYDYPASSYWPYREDYSLTGYYDYHGYHRSQY
SSPDGGGWSQTDGWRTEGYQGRGLQQESARASYADQQGYSHRTDSQHDHSVSERQHRESM
EHGDRTGEVYDSGALANSKASGLSSSSYELSQYINAAEQSEPELITHTDAVRMEVAQLKF
CIPHVAVSFGPAGQLVWVSPALASEGEPAQVELHSLEVILCDTHEQQDMRDFPGPLARED
LHKVDAINFALQMSEKCLKDEELEDATSAALLWHLLILLCRQNGRIMGSDVAELLMRDFS
SLGACGVSGDPADGETLIDLSETPTPEKETLNFADLLTGYPPTDKEAEEQNLQKYTKLLL
SGRKKEALESAMQSGLWGHALFLASKMDSRSYSTVLSRFTGSLASSDPLQTLFQLLSGRI
PAVSMSWSREKWGDWRPHLAVLLSNETGDPIIHHRSIITMGDNLASRDMLYASQICYLTA
QCPFGWYKNKSERLVLLGSKQSVLFPKFCHNSAIRCTELFEYCQRLGNAAFIIPAFQVYK
FLYACRLLDCGLISQAFHYCEVVAKALLKIEEPHLVLLGELIKLVDRLKFSEAQLSDTGQ
PFLDPDWLVQIRCRHQAMLEGRYCTETCQSAVGETTWTHEESNTCSDFTEGFQTDAVNYA
STENEPSYPSQSMIPHTDAHFQESYSPVSHSYSSEEQAPKTVAPVPLYPTQQPVTLPPVF
SMEMSGPPQVSMDQSYSNLDSSSKNYNFHTAASTSFQEAPRSSNDTGADFSADAIMGSAE
NDAIVGSVNQSETIQREDNQRESSAQSAKTSKPGWFSGWFKSKPKEDPKEQIPEPSPTTR
EPTVNFPFPSPPPPIPKASQPQFSGVNPFSRSGQKLSGTMSQNQGSMLQGP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagagggcaaggctggcatacgccaggctatcagtaccagtctagtgagaga
gacgaccactacagatcctcccaccaaacaccgtattactacccacctacagacccgaga
gggagagacagacagtggcctcatgtggatcctcgctatggaaactacatggctagccct
cctcctaaaccagagtatattccaggatatagcaacgcttatgcatcaaaccaaccagta
cacttcagacctcactccaggcaggaatatgactaccccgcctctagctactggccctac
agagaagactactctctaaccgggtattatgattatcatggttatcacagatcacaatac
agctctccagatggtggtggctggagccagacagatggctggagaacagaggggtatcag
ggcagaggactgcagcaggagtcagcaagagcttcatacgcagatcagcagggctatagt
cacagaacagacagtcagcatgaccatagcgtctcagagagacagcacagagaaagtatg
gaacatggagatagaactggagaggtatatgatagtggagctcttgccaactctaaagct
tcaggtctgtcctcgagcagctatgagctcagccagtacatcaatgcagctgaacagagt
gagcctgagctcataactcacacagatgccgtacgcatggaggtagctcaactaaagttc
tgcatccctcatgtggcagtaagctttgggcctgcaggtcagctggtatgggtcagtcca
gcccttgcctctgagggtgagcctgctcaggtggaactccacagtctagaggtaattctc
tgtgacacacatgaacagcaggatatgagggactttcctggaccactggctagggaggat
ttgcataaggtggatgccattaactttgcccttcaaatgtcagagaaatgtctgaaggat
gaggaattagaggatgccacttctgctgccctcttgtggcatttactaatattgctgtgc
aggcagaatggaagaatcatgggttcagatgttgcagaactgctgatgagggacttcagt
tctttgggggcgtgtggggtgtctggtgaccctgcagatggagaaactctcatcgacctg
agtgaaacacccacaccagaaaaagagaccctcaactttgcagaccttctgactggatat
ccaccaactgacaaagaggctgaagagcaaaaccttcagaaatacacaaaactactgctg
tctggcagaaagaaggaggcgctagagtcagccatgcagagtggtctttggggtcatgct
ttatttctggccagcaaaatggacagcagatcctacagcacagtgctgagcaggtttacg
ggcagtctggcttccagtgaccctctgcaaaccctcttccagctgctctctgggaggatt
ccagctgtttccatgtcctggagtcgtgagaagtggggagactggcgaccacacttggct
gttttgctgtccaatgagacaggagaccccattatacatcacaggtccatcatcaccatg
ggtgataacttagcctccagggatatgctgtatgcctcccagatctgctacctcacggct
cagtgtccttttggctggtacaaaaataaatcggaacgccttgtgcttctgggcagcaag
caaagtgttctgtttcccaagttctgtcacaactctgccattcgctgtactgaactcttt
gagtactgccaaaggcttggaaatgctgcatttatcattcctgcttttcaggtgtataaa
ttcctatatgcatgtcggttgctggactgtggtctgatttctcaggcctttcactactgt
gaggtggtggcaaaagctctgctcaagatagaggaaccccatttggtgctgctaggagag
cttattaaattggtggacagactgaagttttctgaagcacagctcagtgacacaggtcag
cctttcctggaccccgactggctggtacagattcgctgcagacaccaggctatgctggag
ggaagatactgtactgaaacatgtcagtcagcagttggggagactacttggactcacgag
gagagcaacacgtgttcagattttacagaaggcttccagacggatgctgtaaactacgct
agcactgaaaatgaaccctcatacccatctcagtccatgataccgcacactgatgcccac
tttcaagagtcttactctccagtgagccactcttactcttctgaagaacaggctcctaag
actgtggccccagtgccactgtacccgacccagcagccagtgacattgcctccagtcttc
tctatggaaatgtctgggcctccgcaagtttcaatggaccaaagctactctaatcttgat
agcagcagtaaaaattataactttcacactgctgcttccacttcattccaagaagcgcca
agaagctccaacgatacaggtgctgacttttctgctgatgcaataatgggttctgctgaa
aacgatgctatagtggggagtgttaatcagtctgagacaattcaaagagaggacaaccag
agagagtccagcgcacaatcagcaaagacctctaagcctggatggttcagtggatggttc
aagtctaaacctaaagaagacccaaaagaacaaatcccagaacccagccccaccactagg
gaaccaacagtcaactttcctttcccttctcctcccccacccatcccaaaagcatcacaa
ccccaattcagtggagtcaatcccttttccaggagtggacaaaaattgtctgggacaatg
agccagaatcaagggtccatgttacagggtccctaa
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