Garra rufa (doctor fish): 141346708
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Entry
141346708 CDS
T11039
Symbol
pomgnt1
Name
(RefSeq) protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
KO
K09666
beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.-]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00515
Mannose type O-glycan biosynthesis
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
141346708 (pomgnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141346708 (pomgnt1)
Glycosyltransferases [BR:
grf01003
]
Glycan extension
O-Glycan
141346708 (pomgnt1)
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Gene cluster
GFIT
Motif
Pfam:
GNT-I
ILEI
Motif
Other DBs
NCBI-GeneID:
141346708
NCBI-ProteinID:
XP_073707748
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Position
12:28221407..28236266
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AA seq
653 aa
AA seq
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MDTWTPNPRAKPFIPRQQRSLYLTWKYRLTNKRAVRRICQASAVLFLLITVIVNIKLILD
TRRVASEDDAAQEYDDALPNMETPRRPASGRKVLDIEVYSSRSKVYVAVDGTTVLEDEMR
EQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMILFLNMVTRGRILIFTIKDEGTFHL
KDAAKNLLKGLGSQVAVTLGWRDMWTLVVKKGGQVYGEKHSKSPALSTWGDPVLLKTEVQ
LTASEEAECHWADTELNRRRKLFCSKVEGYGSICSCKDPAPIEFNPDPLPNNNVYNVPVA
VIAGNRPNYLYRMLRSLLSSHGVNPQMITVFIDGYYEEPMDVVDLFGLKGVQHTPISIKN
ARVSQHYKASLTATFNLHPDADFAIVLEEDLDISIDFFSFLSQTIHLLREDDSLYCISAW
NDQGYEHTAEDPSLLYRVESMPGLGWVLKKSLYKDELEPKWPTPEKLWDWDMWMRMPEQR
KGRECVIPDVSRSYHFGIIGLNMNGYFHEVYFKKHKFNTIPNVQMKNVDSLKKDAYEIEI
QNLLREANVLDHSKNPCEDSFIPDTEGKTFIMFIKMEQETDTNTWTELAKCLHVWDLDVR
GYHKGLWRLFGKKNHVLVVAVPISPYSFKKPNNVTPIHLEPAPKEEGLPVEQI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacacctggacacccaaccccagagccaaacccttcatcccccgccagcaacgtagc
ctctacctcacctggaaatacagactcaccaacaaaagagcagtacgacgaatctgccag
gccagtgctgtcctgtttctactgatcacagtgattgtgaatattaaacttattcttgat
acaaggagagttgctagcgaggatgatgcagctcaagagtatgatgatgccctgcctaac
atggaaactccacgcagaccagcgagtgggaggaaggttttggatattgaggtgtactct
agtcgatctaaggtttatgtagcagtggacggcaccactgttctagaagatgagatgaga
gagcagggccgaggcatacatgttatagttctaaatcaggcaactggtcacgtcatggcc
aaaagagtgtttgatacttattctcctcatgaggatgaagccatgatcctctttctcaac
atggtcacacgtggccgaatcctcatcttcactattaaggatgaggggactttccacttg
aaggatgcagccaagaatcttctgaaaggtttggggagtcaggtagctgtcactttaggc
tggagggatatgtggactctagtcgtaaagaagggaggtcaagtatatggggagaagcac
tccaagtctcctgctctgtccacatggggtgatcctgtgctactgaagactgaggtccag
ctgacagcttctgaagaggcagagtgccattgggctgacacagagctgaaccggcgaagg
aaactcttctgcagtaaagtggaaggatatggaagcatttgtagttgcaaggatccagct
cccatagagttcaatcctgacccactgcctaacaacaatgtctacaacgtcccagtagca
gttatagctggaaatagaccaaactatctctatagaatgctgcgctctcttctttcctcc
catggtgtcaatccacagatgatcactgtttttatcgatggctactatgaggaacccatg
gatgtggtggatctcttcggtcttaaaggagttcagcatacacctatcagtattaagaat
gctagagtgtcacagcactacaaagccagcttgactgcaaccttcaatctgcatccagat
gcagattttgccattgtcttggaggaagacctggatatttccatagattttttcagcttc
ctcagtcagaccatccatttgttgcgtgaagatgacagtctgtactgtatctcagcctgg
aatgaccaaggctatgaacacacagcagaggatccatctctgttgtaccgagtagaaagt
atgcctggccttggctgggtgcttaagaaaagcctttacaaggatgaactagagcccaaa
tggccaacccctgagaagctatgggattgggacatgtggatgcggatgccagaacagaga
aaagggagagagtgtgtcatccctgatgtctctcgctcttatcactttggcatcattggc
ttaaacatgaatggttacttccatgaagtttactttaagaagcacaagttcaacacaatt
ccgaatgttcagatgaaaaatgtagatagcttgaaaaaggacgcatatgagattgaaatc
caaaacctgctacgtgaggctaatgttctggaccacagtaaaaacccatgtgaagactcg
tttatcccagacacggagggaaaaacctttataatgttcattaaaatggagcaggagaca
gatacaaacacttggacagaactggcaaagtgcctgcacgtatgggacctggatgtacga
ggttatcacaaaggactctggaggctcttcggaaagaagaaccatgtactagtagtggca
gttccaatctcaccatactcttttaagaaacccaataacgtcactcccattcacctggag
ccagcacctaaagaggagggacttcctgtggaacagatttag
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