Garra rufa (doctor fish): 141346840
Help
Entry
141346840 CDS
T11039
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141346840 (rhbdl3)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
141346840 (rhbdl3)
Peptidases and inhibitors [BR:
grf01002
]
Serine peptidases
Family S54: Rhomboid family
141346840 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EH
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
141346840
NCBI-ProteinID:
XP_073707899
LinkDB
All DBs
Position
12:21170229..21292851
Genome browser
AA seq
407 aa
AA seq
DB search
MVNSSPAVAAHAEGEEIEVLESTDVLPVAPEDQWKSLFDKYDPENSGFISTERFRDLLAA
HGSELDPHKLEVLLALADGNADGKICYQDFVNLVSSADELEMSNKRSNSFRRAILQGSRQ
LRNSALREEVGLGLSRRLVRHIAYETLPREVDRKWYFDSYTYCPPPWLMLAITLAEVVVF
MYYGLQLNRWVLQVSSPYFLKGPLPYHPQLRAQAWRYLSYIFMHAGIEHLGLNMAMQLLV
GVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWS
GMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVAVGLTLGVVV
LQNYEQRLQEQSLFWIFFSVYTLFIFCGIFWNIFAYSLLDVKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcatccccagcggtcgctgctcacgcagagggtgaagagatcgaggtgcta
gagagcaccgatgtccttcctgtagctccagaggaccaatggaagtctcttttcgacaag
tatgacccagagaattcaggcttcatcagtacggagcgtttccgagacctgcttgcggct
catggatcagaactggacccccacaagctggaggttcttcttgctctggctgacggaaat
gctgatggaaagatctgctaccaggattttgttaacctggtgagttctgcagatgaactt
gagatgagcaacaagcgctcaaacagtttccgtcgagcgatcctgcaggggagtcggcag
ctcaggaattccgcactgagagaggaagtgggcttgggtctgtctcggaggcttgtacgt
cacattgcctatgagactttgccaagagaggtggaccgcaagtggtattttgacagttac
acctactgtccaccaccatggcttatgctggccatcactttagcagaggttgttgtcttt
atgtattatggactccaacttaaccgctgggttctgcaagtctcatcaccatacttcctg
aagggcccattgccataccacccgcagctcagagctcaggcctggcgctaccttagctac
atcttcatgcatgcaggaattgaacatctgggtctaaacatggccatgcaacttttggtg
ggtgtgccattagagatggttcacggagctttgagaatcggcctggtgtatgtgtgtggc
gtactggcaggttcattggctgtgtcagtgacggacatgacagcacctgtggtcggttca
tcaggtggagtttacgcactggtctctgcccacctcgccaacgttgtcatgaactggtca
gggatgaagtgtcagttcaagctctttcgcatggcaatggctctggtgtgcatgagtgtg
gagtttggtcgtgccgtctggcttcgattctatcccccagccttcccaccatgccctaat
cccagctttgtggcccatctggggggtgtggcagtgggcctcacccttggcgttgtggtt
cttcagaactatgaacagcgtttgcaggaacagtccttgttctggatcttcttcagtgtc
tacacactctttatcttctgtggaatcttctggaacatttttgcttacagtctcttagat
gtcaagttacccccaccaccatga
DBGET
integrated database retrieval system
