Garra rufa (doctor fish): 141346853
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Entry
141346853 CDS
T11039
Symbol
atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
grf Garra rufa (doctor fish)
Pathway
grf04136
Autophagy - other
grf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141346853 (atg3)
04136 Autophagy - other
141346853 (atg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141346853 (atg3)
04121 Ubiquitin system [BR:
grf04121
]
141346853 (atg3)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141346853 (atg3)
Membrane trafficking [BR:
grf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
141346853 (atg3)
Ubiquitin system [BR:
grf04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
141346853 (atg3)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141346853 (atg3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
141346853
NCBI-ProteinID:
XP_073707914
LinkDB
All DBs
Position
12:complement(8280239..8288530)
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AA seq
316 aa
AA seq
DB search
MQNVINSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE
AKVKPYLPKDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGVTGVT
EAVREIALDNKDNMNMNVKTGACGNGDDDDEDEGEAADMEEYEESGLLETDEATLDTSKI
ADLNKTKAEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQ
DHVKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQ
AVIPTIEYDYTRHFTM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgtgataaactcggtgaaaggcaccgctttgggagtggcagagtttttaacg
ccagttttgaaggaatctaaatttaaagaaactggcgttataactccagaggagtttgtt
gcagcaggagatcatttggttcatcactgccccacatggaaatgggcatctggagaagaa
gcaaaggtgaagccctatctgcccaaagacaagcagtttctattaacccgaaatgttcca
tgttacaagcgctgtaaacagatggagtactcggatgagctggaggccattatagaagag
gatgatggagacgggggatgggtggatacctatcataactctggtgttacaggggtgaca
gaagcagttcgggaaatcgcgttggataataaggacaatatgaatatgaacgtgaagacg
ggtgcatgtggaaatggtgatgacgatgatgaagatgaaggagaggcagcagacatggaa
gaatatgaagaaagtggacttttggagacggatgaagcaactcttgacacaagtaaaatt
gctgatttaaataaaaccaaggcagaggctggaggggaagatgccattttacagacaaga
acttacgatctttacatcacatatgataaatattaccagacaccaagactatggctgttt
ggatatgatgaggacagacaacctctaacagtggatcagatgtatgaagacatcagccag
gatcatgttaaaaaaacagtcaccattgaaaatcaccctaacctgcctccccctgctatg
tgctctgtgcatccatgcagacatgcagaggtgatgaaaaagattatcgagaccgtggcg
gaaggaggaggagaacttggggtccatatgtatcttctgattttcctgaaatttgtgcaa
gctgtcattcctacaatagaatatgattacacaaggcatttcaccatgtaa
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