Garra rufa (doctor fish): 141346918
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Entry
141346918 CDS
T11039
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04060
Cytokine-cytokine receptor interaction
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141346918 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
141346918 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
grf04052
]
141346918 (gdf5)
Cytokines and neuropeptides [BR:
grf04052
]
Cytokines
Transforming growth factors (RSTK binding)
141346918 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
141346918
NCBI-ProteinID:
XP_073707979
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Position
12:complement(41755978..41764193)
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AA seq
499 aa
AA seq
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MKVLTSLPLLLGFWTLLYLDFIPQALSIPRVAGHRGAGAAKPNSRLPVARNGTTLLKPSD
NAKISRIRAGPPLIKAEPNPGRAAVPVSLGRREAARSWVPKDAARVASSSSVQLQAGHNK
GVSAQKSAVPAAIRAGQTNAGVMKSNAPAPAHLKAANAVKLEYSEEPKHPLVTPHDYMLS
LYWSLTSKEVNTSVLHEAGMANTITSFVDRGQDDRAPLLRRQRYLFNISSMEKEGLLGAE
LRILRKKHMDSRKTMFTEGMVSLRLYTCASGKHGPVLLQARTIDPHSAPYWEVFDIWKVF
KSFRNAPQLCFELEAVNQGRPLDLRLLGLGRTGRQNQEKAFFVVFGRSKKRGLFYNEIKA
RSGHDNKTVYEYLFTQRRMRRAPLPRGKKPPKNPKQRCNRKQLHVNFKEMGWDDWIIAPL
EYEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPRSTPPTCCVPTRLSPISILYIDSA
NNVVYKQYEDMVVESCGCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgactagtctccctcttttactgggcttctggactctcttatacctggac
ttcatcccgcaggcgctctccatccccagagtggccggtcacaggggcgccggagcggcc
aaacccaactcacggttaccggtggcgcgcaacggcacgacgctcctcaagccctctgac
aacgcgaagatctctcgcatccgggccggtccacctcttataaaagccgagcctaacccg
ggtcgcgccgcggtccctgtgagtttaggacgcagggaggcagcgcgctcttgggtaccc
aaggatgcggcaagagtcgcatcctcttccagcgtccaactccaagcgggacacaataaa
ggagtttctgcacagaaatccgccgtgccggctgcgatcagggctggtcaaaccaacgct
ggcgtgatgaaaagcaatgcaccggcacctgcgcatctgaaagcggcgaacgcggtaaag
ctggagtacagcgaggaacccaaacaccctttagtgacgccccatgactacatgctgtcc
ctgtactggtcactgaccagcaaagaggtcaatactagtgtcctgcacgaggctgggatg
gccaataccatcacaagctttgtagacagaggacaagatgaccgtgcacccctgctgagg
cgtcaacgttacctcttcaacattagctcaatggagaaggagggtctgttgggtgcagag
ctgcgcatcctccgaaagaagcacatggactctcgtaagaccatgtttactgagggcatg
gtatctttaagactgtacacctgtgcctcaggtaagcacggacccgtcctgctgcaggct
cgaactatcgaccctcacagcgctccgtactgggaagtgtttgacatctggaaagtgttc
aagagctttagaaacgctcctcagctttgctttgagctggaggccgtcaatcaaggccga
ccgctcgacttgcgattgcttggcctgggtcggacgggaaggcaaaatcaggagaaagcc
ttttttgtggtgtttgggcgttcgaaaaagcgagggctgttttacaacgagatcaaagcc
cggtctggtcacgacaacaagaccgtctacgagtacctcttcacccagcggcggatgcgt
cgggcaccattgccacgtgggaaaaaaccacccaagaatcccaaacagagatgcaaccgc
aagcagttgcacgtcaactttaaggaaatgggctgggacgactggatcatcgcgcctctg
gagtacgaggccttccactgtgacggcgtctgcgactttcccatccgctcccatttggag
cccaccaatcacgccatcatccagactctcatgaactctatggatcccagatccacgccg
ccgacctgctgcgtcccgaccagactcagccccatcagtatcctctacattgactcggcc
aataatgtggtgtacaagcaatacgaggacatggtggtggagagctgtggttgcaggtag
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