Garra rufa (doctor fish): 141347087
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Entry
141347087 CDS
T11039
Symbol
lrrc8db
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Db
KO
K22038
volume-regulated anion channel
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141347087 (lrrc8db)
Ion channels [BR:
grf04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
141347087 (lrrc8db)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_9
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
141347087
NCBI-ProteinID:
XP_073708168
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Position
12:complement(19085567..19097332)
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AA seq
841 aa
AA seq
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MFTLTEVASLNDIQPTYRILKPWWDVFMDYLGVVMLMLAIFAGTMQLTKDQVVCLPVLES
LEDQTPVATERPPEKALGSGTGGGHVTLAAAPLASKEQTDSVVQHFPQSSAVRQPQPTGL
RTNLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTIVLMVSSNFWFKYPKTSSKIEHFV
SILGKCFESPWTTKALSETACEDSEENKQRLTGASTLPKHLSTSSEEGSPNQSTPMLAKS
NIKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRTHVEDSDMIYKLYVAQTIIKTV
KFILILCYTMTFVTSIKFDHDCEPEIKHLTGYTKFKCTHNMAFMLKKLLVSYIVLIFVYG
MVCIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVF
LSEVSENKLREISLNHEWTFEKLRQHVTRNAQDKLELHLFMLSGVPDAVFDLTDLEVLKL
ELIPEARITAKISQMINLHELHFYHCPAKVEQTAFSFLRDHLRCLHVKFTDVGEIPTWVY
MLKNLRELYLVGNLNSENNKMIGLESLRDLRHLKILHLKSNLTKIPTNITDLSPHLIKLV
VHNDGTKLLVLNSLKKMMNLAELELHNCELERIPHAIFSLTILQELDLKSNNIRTIEEVI
SFQHLKRLNCLKLWHNKIISIPLSISHVKNLEFLYLSHNKLETLPTTLFSLLKLRYLDVS
HNSIVVIPPEVGFLQNLQHFAITGNKVEVVPKQLFKCTKLRTLSLGHNCISLLPEKIVQL
LQLTHLELKGNCLDRLPAQLGQCRLLRRNGLIVEDHLFDSLPLEVKESISQETSATFANG
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctcacagaagttgcctctctaaatgacatccagccaacttatcggatactg
aaaccatggtgggacgtctttatggattacctgggtgtggtcatgcttatgctggccata
tttgccgggaccatgcagttaaccaaagatcaggtggtttgccttcctgttctggaatcg
ttggaggaccaaacccctgtggccacggaaaggccaccagagaaagcacttggctcaggg
acaggaggaggccatgtgacattggcagctgcacctttagcaagcaaagaacaaaccgac
agtgttgtccaacacttcccacagtcgtctgctgtcaggcaacctcagcctacgggttta
cgaacaaatctggattttcagcagtatgtctttgttaatcagatgtgctaccatgtcgcc
ctcccatggtattcaaaatactttccatatctagctctcattcacactattgttctcatg
gtgagcagtaacttttggttcaagtatccaaagaccagttccaaaattgagcattttgtg
tctattttgggaaagtgtttcgagtccccttggacaaccaaggcattgtcggaaacagcc
tgtgaagactctgaagagaataagcagagattgactggagcctccacgttaccaaagcat
ctttcaaccagcagtgaggagggaagtccaaatcagtccacacccatgcttgcaaaatct
aacattaagttttctgcagagaagccagtcatcgaagttccaagtatgactatactggat
aagaaagatggagagcaagctaaagcactttttgagaaagtcaggaagttccgcacgcat
gtcgaagacagcgacatgatctacaaactctatgtagcgcaaacaataataaaaactgtc
aaattcattctgattctgtgctacaccatgacctttgtcacatccattaaattcgaccat
gattgtgagcctgaaatcaagcatttaactggatacacaaaatttaaatgcacccacaac
atggcttttatgttgaaaaaacttctcgttagctacattgtcctcattttcgtttatggc
atggtttgcatctacactcttttttggttgttcaggcggcctctgaaagagtactctttt
gagaaagtcagagaagaaagcagttttagtgatatcccagatgtgaagaatgactttgct
ttcctcctacacatggtggaccagtatgaccagctgtactcgaaacgtttcggcgtcttt
ctctcagaggtaagcgagaacaaattgcgggaaatcagcttaaaccacgaatggaccttt
gagaaactacgccaacatgtgactcgcaatgcgcaggacaagcttgagctgcatcttttc
atgctctcaggtgttcctgatgcggtttttgacctcactgatttggaagtcctgaaacta
gaactcatcccagaggcacgtatcacagcgaaaatctcccagatgatcaacctccacgag
ttgcacttttaccactgccctgccaaagtcgaacagactgcgttcagtttcctccgcgat
cacctccggtgccttcacgtcaagtttacggatgtaggagagattcccacttgggtttac
atgctgaagaacttgagagagctctacttggtgggaaacctgaactctgagaataacaaa
atgataggattggagtccctcagggacttgaggcatctaaagatcctacatctgaagagc
aaccttaccaagatcccgactaacatcacagacttatcaccccacctgatcaaacttgtg
gtccacaatgatggtactaaactcttggtgttgaacagcttgaaaaagatgatgaacctt
gctgaactggaactgcacaattgcgaactggaaaggataccgcatgccatttttagtttg
accatcctgcaagagttggacttgaaatcgaacaatatccgtactatcgaagaggtcatc
agtttccagcaccttaaacggcttaactgcctcaaactgtggcataacaaaatcatttcc
attccactgtccataagtcacgtcaaaaacctagagttcctctatctgtcgcataacaaa
ctggagaccttgcctaccactctgttcagtcttctcaaactgagataccttgatgttagt
cacaactccatcgtggtgattcctccagaggtggggtttctccaaaatctacagcacttt
gccatcacaggaaacaaggtggaagtggtacccaagcagctgttcaaatgcacaaagttg
cgtaccctatcccttgggcacaattgcatctcgttgctgcccgagaaaatcgtgcagttg
ctgcagcttactcatcttgagctgaaggggaactgcctggatcgcttgcccgcacagctt
ggccagtgccgactcttgcggcggaatggcctcattgtggaggatcaccttttcgattca
ctgcccctagaggtcaaagagagcataagtcaggaaaccagtgctacttttgctaacgga
gtgtga
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