Garra rufa (doctor fish): 141347115
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Entry
141347115 CDS
T11039
Symbol
cacng1a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 1a
KO
K04866
voltage-dependent calcium channel gamma-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141347115 (cacng1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141347115 (cacng1a)
04261 Adrenergic signaling in cardiomyocytes
141347115 (cacng1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141347115 (cacng1a)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141347115 (cacng1a)
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Paralog
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
PDR_assoc
DUF2975
DUF8570
Motif
Other DBs
NCBI-GeneID:
141347115
NCBI-ProteinID:
XP_073708203
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Position
12:complement(15960157..15968118)
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AA seq
225 aa
AA seq
DB search
MLKETKTKILFFVLMVGSVCMLTAVVTDHWAVLSPRVESVNTTCEAAHFGLWRLCKKHIY
IEDEELIGKGCGPISLPGEINCSYFRHFTPGEDSEIFEVKTQREYNISAAAIAIFSLVFM
ILGTLCLLGSLSKGKDYLYKPAGMFFAFAGLCAIISVEVMRQSVKRMIESEETIWIEYYY
SWSFACACTGFVLLLLSGIGLLVISMPQMPRNPWETCMDAEPEQI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggaaaccaagacaaaaatcttgttttttgtgctcatggtgggctcagtgtgc
atgttaacagcggttgtaacagaccactgggccgtgttgagtccacgagtggagagcgta
aacacaacatgtgaggcagcccactttggcctttggagactttgtaagaaacacatctat
attgaggacgaggaattgattggtaaaggttgtggacctatcagcttaccaggggaaatc
aactgctcttacttcagacacttcacaccaggggaagattctgagatctttgaagttaaa
actcaaagagaatacaacatctcagcagctgccatagccatcttcagtcttgtcttcatg
attctgggcacactgtgtttgttgggttccctcagtaaaggaaaggactatctgtacaag
cctgctggcatgttctttgcttttgcaggtctatgtgccataatctcagtagaggtaatg
cgtcagtcagtcaagaggatgatagaaagtgaggagactatctggatcgagtattactat
tcctggtcttttgcgtgtgcatgcacgggttttgtcctgctgctcctcagtggaattggt
ctgctggtcatctccatgccacagatgcctagaaatccctgggaaacctgcatggacgct
gaacctgaacagatatag
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