Garra rufa (doctor fish): 141347148
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Entry
141347148 CDS
T11039
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
141347148 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141347148 (gli1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
141347148 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
141347148
NCBI-ProteinID:
XP_073708242
LinkDB
All DBs
Position
12:complement(46328741..46397346)
Genome browser
AA seq
1422 aa
AA seq
DB search
MPVDMQPHQGLYHYDNTANQPSRGLAPSVRVPYSEVSSVCAAPPDSREMYNPSMTPGACM
DPYMRPPHAPPPHSMMGHRGMPPPEGVSGAPYCNQSMMGSHHNLSHNQPGSEHMGSGDAS
CFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCGQNAASSYGHLS
VGTMSPSLGFSSSMNYPSRPQGNMYGSLAHPGPSCHGPPPRLPPHNPRLHAPPKHTHLKT
EPVLGSVMDSINIKNLEEHSEGDVASPSSTGTQDPLLGLLEGRDDLDKEEKPEPEAIYET
NCHWESCIKEFDTQEQLVHHINNEHIHGEKKEFVCHWKDCSREQRPFKAQYMLVVHMRRH
TGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRT
HSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPGLTTPGQSS
ELLIEKEERSREDCKLLAPETTLKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAG
SLEDLTTQEDSGNTGVAESSGGGSSGMCMSVQALKRLENLKIDKLKQIRRPTPPGRSAGN
KLPALSGATGEMMGMCAPSPLLSNRRVMELSAPELGGVSTMGMPCPPNDRRGSGTSSLSS
AYTVSRRSSMVSPYLSSRRSSDVSQMGHSQSVMGTDMPGDPLSPQNSQRPGSCQNSGGLP
GLPSLTPAQQYSLKAKYAAATGGPPPTPLPNMDQPRTPGRFLRECHGQPLPPFLQQGGTR
RHSANADYGTGVIYPHQAPGNNTRRASDPVRSTADPQGLPKVQRFNSLSNVSLMSRRNAL
QQCGSDAALSRHMYSPRPPSITENVMMEAMAMEPHGTAEGREQGMIQGGDRAYMGYPQTQ
HHLHNASQLSPGQESLGCLDQVYQTQMQGPYQGQREEICTSGMMGQADIANNLLQQAEYG
MSNCQLSPSGPHYPSQGDGSGPWGQTNQLQGPQTDMQYQGAGMQGQHYTQQGVYNPTSDP
GHQRVTVKPEQFHPSMGGSSSCQNTKPLHQHRHNANMQAYPPQSGQGLMSRSSNINCDFH
QGQMGTQAGLPQQSQAGSFPSGGGINLALAESRRSQTPMHQMKEMMVRNYVQSQQALLWE
QQQEQRVVDGLSGKPDGMDMGGQTAMMQHSPQHQQVNQNLYPGNSYQGYPNQNLMSPPQK
LIPSSIKEHAAGMQGSCYGPDMVPRPPQGRKPLSRQNSLSQQGGGTYLGSPTHLSPVHST
ASPRRGVRLPPVQQQQQHSENFTNNNNPMYYSGQIHMHHDIEKTQDGPCLAQQHLTGIDP
NTKPTSMAYSDPAPMSNALENLDLENAQIDFASIIDDPEPSSYSPINPPLGHHQCSSQTS
SRLTTPQTSITLPSGLSNMAIGDMTSMLTSLAGENKYLNTLS
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcagccgcaccaggggctgtaccactacgacaacaccgccaaccag
ccgagcagaggactggctccgtcagtaagagtgccctacagcgaggtgtcgtctgtgtgt
gcggcgccgccagacagcagagagatgtacaacccctccatgaccccaggagcctgtatg
gacccctacatgcggcccccacacgcccctccgccgcacagcatgatgggacaccgcggg
atgcctccgcctgagggtgtcagcggcgccccctactgtaaccagagcatgatgggatct
catcacaacctctcgcataaccagccgggatctgaacacatgggatcaggagacgcatct
tgtttctcgacgcctcgctccatgctgaagttgagtaagaagcgtgctctgtccatctcg
cccctttcggacgccagcgtagatctgcagacggtcatccgcacctcgcccaactctctg
gtggcgtttgtgaactcgcgctgtgggcagaacgctgccagctcatacggacatctgtct
gtgggcaccatgagtccgtcgttgggtttctccagttccatgaactacccttccagaccg
caggggaacatgtacggctctctcgctcatccaggcccatcgtgccacgggccgccgcct
cgcctgccgccacacaaccctaggcttcacgctccgcccaaacacacacacctgaagaca
gagccggttctgggcagtgtgatggacagcataaacatcaagaacctggaggagcattcg
gagggagacgtggcgagtccatcctcaactggaacccaggatcctcttctgggtttactg
gaaggcagagatgatcttgacaaggaggaaaaacctgaaccagaggccatttatgagacc
aactgccactgggagagctgtatcaaagagttcgacactcaggaacaacttgtgcatcat
atcaataacgagcacattcacggggagaagaaggagtttgtgtgtcactggaaggattgc
tctcgagagcagcggccctttaaggcccagtacatgcttgtggtccacatgcgcagacat
acgggagagaaacctcacaagtgcacttttgaaggctgtaataaagcgtactcgcgtctg
gagaacctgaagactcatctgcgctcgcacaccggcgagaaaccctatgtgtgtgaacac
gagggctgcaacaaggctttctccaatgcatcggaccgtgcaaagcaccagaaccgaaca
cactctaatgagaaaccgtatgtttgtaagatcccgggttgtacgaagcgctacactgat
ccaagctctctaagaaagcatgtgaagacggtacacggacccgaggctcacatcactaaa
aagcaccgcggagacaccggaccacgtcctccgggtctgaccactccaggacagagctct
gaacttctgatagaaaaagaggagagaagcagagaggactgcaaattactcgctccagaa
accacactgaaatcccagccaagtcctggcggccagtcgtcctgtagtagcgaacgttct
ccactagggagcgccaacaacaacgacagcggagtggagatgaacctcaatgcggcgggg
agtctggaggacctgacgacacaagaggacagcgggaacaccggtgtggccgagtcaagc
ggcggcgggtcaagtggaatgtgcatgtctgttcaggccttgaagagattggagaacctg
aagatcgacaaactgaagcagattcgccggccaacaccacctggacggagcgcagggaat
aaactaccggctctctcaggagcaacgggagagatgatgggcatgtgtgcgccttcaccc
ttgctctccaaccggcgtgtaatggagctttctgccccggaactgggcggagttagcaca
atgggaatgccctgtccaccgaatgaccggcggggcagtggcaccagcagcctcagttct
gcctacacagtgagccgccgttcatccatggtctcaccctacctatcaagcaggcgctcc
agtgacgtgtcccaaatgggccacagccagtccgtaatggggaccgatatgcctggcgac
ccgctgtctccccaaaacagccaaaggcctggatcgtgccagaactctggtggattgcca
ggtttgccgagtctgactcctgcgcagcagtatagtttgaaggcaaaatatgcagcagca
acaggcggtccaccgccaaccccgctacctaacatggaccagcccagaacccctggaaga
ttcctgagggaatgccacggccaacctcttccaccatttctgcagcaaggtggcacaagg
aggcacagcgctaatgccgactatggcacgggagtgatctatccacatcaggcacctggc
aacaatacgaggcgcgccagcgacccagtacgctcgactgccgacccgcagggtttaccc
aaagtgcagcgcttcaatagcttaagcaacgtgtccctcatgagtcgccgcaatgcactg
cagcagtgcgggtctgatgccgctctcagcaggcacatgtactcgcctcgtccaccgagc
atcactgaaaatgtcatgatggaggccatggccatggaaccccacgggactgccgaaggc
agagagcaaggcatgatccaaggtggagaccgagcctacatgggctacccgcaaactcaa
caccaccttcacaatgccagtcagctatctcccggacaagaaagtctgggatgcttggat
caagtctaccagactcaaatgcaaggtccgtaccagggccagcgtgaggagatctgcacc
tccgggatgatgggtcaggctgacattgcgaacaatcttctacagcaagctgagtacggc
atgagcaactgtcagctcagcccctccggtccacactatcccagccaaggcgatggatca
ggaccttggggacagaccaaccagctccagggtcctcagactgatatgcagtaccaaggt
gcaggcatgcaaggacagcactacactcaacagggtgtatacaaccctacatctgaccct
ggccatcaaagagttactgtaaaaccagagcagttccatccatccatgggagggtccagc
tcttgccagaacaccaaacctctacaccaacatcggcataatgcaaacatgcaggcgtat
cctccacagtcaggccagggcctcatgagcaggtcctccaatataaattgcgacttccat
cagggccagatgggaacccaagccggtcttccacagcagagccaggcgggatcgttcccg
agtggcggagggattaatcttgctctggcggagagccgtaggtcccagacgccaatgcat
cagatgaaggaaatgatggtgaggaactatgtgcagtcccagcaagcgctcctgtgggaa
cagcagcaggagcaaagggtagtcgacggtctctctgggaagcctgatggcatggacatg
ggaggacaaacggcgatgatgcagcacagtccgcagcatcagcaagttaaccagaacctt
tatcctggtaactcttaccaaggctacccaaatcagaacttgatgagcccaccacaaaag
ctcattcccagttccatcaaggagcatgcagctgggatgcagggatcatgctacggtccg
gacatggtgccacgaccacctcagggacgaaaacctctgagtcgccagaacagcctctct
cagcagggaggtggaacttacctgggcagcccaactcacctcagcccggtccactccacc
gccagtcctcgaagaggagtgcggctcccaccggttcagcaacagcagcagcattcggaa
aacttcaccaataacaacaaccccatgtactactcaggccagatacacatgcaccacgac
attgagaagactcaggatggtccgtgcctggcccagcagcacctgacagggatagaccct
aataccaagcccacctcgatggcctactcggaccctgcacccatgtccaacgccttagaa
aacctggacttggagaacgctcagattgactttgcttccatcatcgatgacccagaacct
tcatcttacagtcctataaacccaccgcttggacaccaccagtgctcttctcagacctcc
tcccgcctcaccacaccccaaacctccatcacccttccaagtggcctttctaatatggca
atcggggacatgacctcaatgttgacatcccttgctggggagaacaagtatttgaacaca
ttgtcttaa
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integrated database retrieval system
