Garra rufa (doctor fish): 141347161
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Entry
141347161 CDS
T11039
Symbol
mbd6
Name
(RefSeq) uncharacterized protein mbd6 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141347161 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141347161 (mbd6)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
141347161 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
141347161
NCBI-ProteinID:
XP_073708263
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All DBs
Position
12:complement(46134767..46154646)
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AA seq
1125 aa
AA seq
DB search
MTGGSESAAGEKDGGTTLIAQIPVGWQRKVEDGTVSYISPSGTVLRSVDEVRVYLRTDGT
CKCGLECPLVPNKVFNFEPAAMVQAPGHQSGKIEEDMTKLCNHRRKVDAMAALCQSMQPS
HHPPPAQATGGVVCSVDGREPRGSMVAHGDGTHCTYPQPRHIQPKSNIVFPLSSPRSVVQ
NGSVNLTTISRPPEQGSPLKKPQTPVGCMPGYAKQQWSPHPPLTQRTVHNPSSPNSLKPS
VHTHIHHSDPSNSFTLSPSSTIALSGRAAPSVKSPSPLSPSRSLDTFSPHQRSRHSSTSS
LSDHGAQGPVFIQGGKPHQQPTMPCSSPKLPLAPSSPCSRLEGILQHYKDCSTSNTSSSA
NSSNQSNQALSLVHPNIVDKRNGVSSAQAPGLLGLPLGQILNQQKTQQKGHINNSFPASS
LLSAAAKAQLANQKTQLNAADVLAALPLTGLDKEQQSKVLISTLNSSVHPTSARAQSMTA
LLLPHSPSLSLASPAVAEKNLRRKRQRRSPTVLTMLKDSQLGRTPGDLSGPPHLISPCLS
PPSPPVPHLDNHRLPVAPLRLQDSEEGRKPGLANSLPLSSPSPSQPLSALLQLLSMQNAT
QQSSGTTAMPGNRHTNTLPSSPRPITPQTPQCDVQSTLRLHNLTPQPQSTVAMPESLQQP
FSLMGDETTMNLKTTSSNTILNLSQPHTGTTPDLSCSILSMMNQMSSTCLPSFPEKSCGT
KTTEACPDHSTYQINQAVESKGHIEMMDQPDSDTRLLGGCEPDHSLSLPNAPSSDLSNPT
NDPSVSLPLAEAFPFMSQEQLLQLLSSNAGLPSLLPPFLGSLPLGVWTGGQPSAPGGTQA
QQPQPASAILNQGSPLNVMNQGELPLNLVSLLNPPGSAAALPPVPGVEAGEKPPGLQALL
MASLLLGQNPAAMLPLPALNLELPTPPQQVFADGVSLEKTPSLLDSVLMGPGLLEALQTL
VPGADGQSLLLSAPLTPPPPAFLSLNPALLAAALAQAEPLPNHTPSPPPHSQGTLSNPAL
VSTSVSCGPLVSSTGPEVCDPLAEQDKNNTQTPHFLPPLLAPGVLGDLTALGNINSLHGL
LGAGPLLLPQGPSLSVPLTQNQTGLNPPHLSAADDGDGREACGSS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaggcagtgagagtgcagcaggagaaaaagatggaggtacgacgctcatcgct
cagatcccggttggctggcagaggaaggtggaagatgggactgtgtcttacatcagccca
agtggtaccgttcttcgatctgtggatgaggtgagggtgtatctgcggacagacggcaca
tgtaaatgtggtctcgagtgcccgcttgtccccaataaggtctttaattttgaacctgct
gcgatggtccaagctcctggtcatcagtcggggaaaatagaggaagacatgaccaaactc
tgtaaccatcgcaggaaagttgatgccatggcggcgttatgccaaagcatgcagccctcc
catcatcccccgccggctcaagccacaggaggtgttgtatgctcagtggacggcagagag
ccgagaggatcaatggtggctcatggagacggcacccactgcacttaccctcagccaaga
cacatccaacccaaatccaacattgtctttcctctgtcctctcctcgttctgttgtacaa
aacggatccgttaacctcaccacaatttcacggcctccagaacagggttcacctttaaag
aaaccccaaacgccagtgggctgcatgcctggttacgcaaagcagcagtggagccctcat
ccaccgctcacccaaaggacagtgcacaacccctcttctcctaacagtttaaaaccaagt
gtacacacacatatacatcactcagacccctccaactcctttaccttatccccttcttca
accatagctctaagtggtcgagcagctccaagtgttaagtcgccctctccactatcaccc
tcgcgttccttggacactttttcaccccaccaacgctctcgccactcatcaacgtcctcg
ctctcagatcacggggcccaagggcccgtcttcatccaggggggcaaaccccatcagcag
cccaccatgccatgctcctctcccaagcttcctcttgcgccttctagtccgtgtagtcgc
ttggagggcattctgcagcactacaaagactgtagtacctctaacacgagctccagtgct
aactctagcaaccaaagcaaccaagccctgtcgttggtgcatcccaacatagtcgacaag
aggaacggagtgagctctgctcaagccccaggactgcttggccttccactagggcagatt
ctcaaccaacagaagacccagcaaaagggccacatcaataactctttcccggccagcagc
ctcctctctgcggccgctaaagcccagctggccaaccagaaaacccagcttaatgcagct
gatgtgctggccgcactccctcttacgggcttggacaaggagcagcagtcaaaggtattg
attagcactttaaacagtagtgtccaccccacttccgccagagcacagtccatgaccgcc
ctgttgcttccgcactccccttccctttccctggcttcccctgctgtcgctgagaaaaac
ctgaggcgcaaacggcagaggcgctcgcccaccgttttgaccatgctcaaagactcgcag
ttaggtcggactccaggggatctctctgggccgcctcatctcatctccccatgcctttcg
ccaccttctcctcccgtacctcacttagacaaccaccggctgcctgtcgctcctctgagg
ttgcaggattcggaggaaggcaggaagccaggacttgctaattcccttccactttcctct
ccatctccatcccagcctctttccgccctgcttcagcttcttagcatgcaaaacgcaacc
cagcaatccagcggcaccactgccatgcctggcaataggcacacaaacacgttgccctct
tcacccagacccatcactccacagacgcctcagtgtgacgtgcagtccacattgcgttta
cacaaccttactccgcaaccccaaagcacagtggccatgccggaatctctccagcaaccc
ttttctctgatgggtgacgagacaaccatgaacctcaaaacaacctccagcaacaccatc
ctgaacttgagccagccccacacgggcacgacgccggacctcagctgttcaattctgagc
atgatgaatcagatgtcctcaacatgcttgccctcgttcccagagaaaagttgtggaact
aaaacaacagaggcttgtcctgaccacagtacctaccagattaaccaagctgtggaaagt
aaaggtcatatagagatgatggatcagccggactcggacacaagattgctgggtggctgt
gaacccgaccacagcctctctctgcccaatgccccctcttccgacctttcaaaccctaca
aacgaccccagtgtttccctgccgcttgcagaggcttttcccttcatgtcccaagaacag
ctcctccagcttctctcctccaatgccggtttaccttccctgctgccgcccttccttggc
tccctgcctttaggagtctggacgggcggccagccctctgcgcccggtggcacccaagcc
cagcaaccacagccagccagtgccatcctgaaccagggctctcctctcaatgtcatgaac
cagggcgagcttcctctcaaccttgtgagcctgttaaatccaccaggttctgcagcagcg
ctgccccctgttccaggagtggaagctggtgaaaaacctcccgggcttcaagccctcctc
atggcttcgttgctgctcggccagaatccagctgccatgctaccactaccagcgctcaac
ctagagcttcctacaccaccgcagcaggtctttgcagacggagtgtccctggagaagacg
ccttctctgctggactctgtcctgatggggccggggctactggaggctcttcaaactcta
gtgcccggtgcagacggccaatcgctgcttctttccgctcctctcactccaccccctcct
gccttcctatccctcaaccctgctctgctggccgcagctctcgcccaagccgaaccccta
cccaaccacacgccatcccccccgcctcattctcaggggactctgtccaaccctgctcta
gtttctacctcggtgtcctgcggccctctggtgtccagcacggggccggaagtgtgtgac
cccttggctgagcaggacaagaacaacacccagacacctcatttcctgccgcctctactc
gcccctggggttcttggtgacctcacagctctgggtaacatcaacagtcttcatggttta
ttaggagctggaccgctgctgctgccgcagggaccgtctctgagcgtccctctaacacag
aaccaaacggggctcaacccgcctcacctgtctgcagctgacgatggcgatgggagagaa
gcctgtggctcttcatga
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