Garra rufa (doctor fish): 141347179
Help
Entry
141347179 CDS
T11039
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141347179 (sox21a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141347179 (sox21a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
141347179
NCBI-ProteinID:
XP_073708284
LinkDB
All DBs
Position
12:8573651..8574729
Genome browser
AA seq
238 aa
AA seq
DB search
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGDSGPLKSARLPGDALTDSM
SAEKTSVAAATRVFFSHHLSANPYPFLDQISKMSELPPAPFPHYSMLGYPGGVSAFPGMG
VLAGAPHALPSPGNPGHMVPYNCLGWPGSGPAVPSSYVLFPGMTKAQHEPYLTYAAAI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaaacgtcccatgaacgcttttatggtgtggtcaaga
gcccagagacggaaaatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgccttggcggtgaatggaaacttctgtcagactctgaaaaaagaccttttattgacgag
gccaaacgtcttagagccgttcacatgaaagaacacccggattacaaatacagaccgagg
cgaaagcccaaaaacttgattaaaaaagacaggtatcatttcaacgtgacgtacaatctg
ggtgacagcggcccgttgaaaagtgcgcggttacccggtgacgcgcttacggactctatg
agcgcggagaaaacgtctgtcgccgctgctactcgggtgtttttcagtcaccacctgtcc
gccaacccatatccgtttctcgaccagatatccaaaatgtcggaattaccccctgcacct
tttccacattactcaatgcttgggtatcccggtggggtctccgcgtttcccggtatgggg
gttctggccggtgcgccacacgcgctcccgtctccgggtaacccgggccacatggtacct
tacaactgcctgggctggccaggttctggacctgctgttccttcctcttacgtgcttttt
ccaggaatgaccaaagctcaacatgaaccttatctgacgtacgctgcggcgatatga
DBGET
integrated database retrieval system
