Garra rufa (doctor fish): 141347255
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Entry
141347255 CDS
T11039
Symbol
dnajc6
Name
(RefSeq) auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141347255 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141347255 (dnajc6)
03110 Chaperones and folding catalysts [BR:
grf03110
]
141347255 (dnajc6)
04131 Membrane trafficking [BR:
grf04131
]
141347255 (dnajc6)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141347255 (dnajc6)
Chaperones and folding catalysts [BR:
grf03110
]
Heat shock proteins
HSP40 / DNAJ
141347255 (dnajc6)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
141347255 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
141347255
NCBI-ProteinID:
XP_073708362
LinkDB
All DBs
Position
12:complement(27066056..27115065)
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AA seq
987 aa
AA seq
DB search
MSLLGGYKKKSSYDGYESLQLVDSSGDFCTGGRSGGGGGGGGGGLTAVTLGSVKTGPARQ
DDYSTMDSSEGPPSPHMDGNYGGGLLDMVKGGAGKFFSNIKDNLKDTIKDTSTKVMNQVA
TYTKGELDIAYITSRIIVMSYPAETVEMGYRNHTEDIRSFLDSRHADHYTVFNLSQRNYR
GAKFSNRVSECNWPSRQAPSLHNLFAVCKNMYNWLKQNPKNVCVITCSDGRAPSGVLVCA
MFCFCHLFANPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSLVSEKPTIPHSKPLVIKSVT
MSPVPCFNKQRSGCRPFCDVLIGETKIFSTAQEYERMREHRIQEGKVVFPVSVSAQGDVV
ISVYHMRSHALQAKVTNTQIFQIQFHTGFIAPGTTVLKFMKTELDACDSPEKYPQLFHVL
IDIEVESTEKQKDLTPPWEQFPTKDLSPNVLFSGHQEHQDALAIADEMEGLDLEDPAQGH
GSCGGRVGPNEESEPSDDEMLSLSSQQSNASNEKSKAAKKAEPQPTAAPPPAAEEVDLLG
LDGDAAKLPPSSPQPPTTSTTTDLLGDLFGAPPTPQPASGPTSAQSTPRRSATSSSPCPS
PRSGGTFDPFGSGPAPSPKPQDFMGSFLGPGNMGQPDPFLHAARSPSPTMQNMGMGRSSP
VPPTTPTVNIQQQSSTGAWEWNKTPPASGGFGMGSKSASTSPTSSVHGTPTHQAKPNTLD
PFADLGNLGAGLGGGGSGFSSKPTTPTGTGGALPPMGSPQRPAPSPQHTASGGWHPGTGF
PSWQPGGGAQWQPQAQGAQHQTPPKAPGPSMPHTSPQNRPNYNVSFSSMGGASPRATGAK
EQPNMGTRPKVLDANFDDLLSGQGFAGIKERKGPKTIAEMRKEEMAKEMDPEKLKILDWI
EGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGKPY
EQYAKMIFMELNDAWSEFESQGQKALY
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctaggtggctacaagaaaaagagcagttacgatggctacgaatctttgcag
ctggtcgatagcagcggagacttctgcaccgggggacgaagcggcggtggtggaggcggc
ggcggcggcggtttgacggcagtgaccctcggcagcgttaaaacaggccccgctcgacag
gacgactacagcaccatggacagctcagaaggccctccgtctccacatatggacgggaac
tatggagggggacttctggatatggttaaaggaggtgctgggaagttcttcagcaacatc
aaggacaacctcaaagataccatcaaagacacctctaccaaggttatgaaccaagtggcc
acgtatacaaaaggagagttggacattgcctacatcacctcacgtattatcgtgatgtca
tatcctgctgagacggtggagatgggctacaggaaccacacagaggatatccgttctttt
ctggactcacggcatgccgaccactacactgtttttaacctgtcacagaggaactatcgg
ggggccaagttctccaacagagtttctgaatgcaattggccttccagacaggccccgagt
cttcacaacctatttgccgtgtgtaagaatatgtacaattggctcaagcaaaaccccaag
aatgtgtgtgtgatcacctgttcggatggcagagctccttcaggcgtgctggtctgtgcc
atgttctgtttctgccaccttttcgccaacccggtgccagccatgcagcttctcagcgcc
aagaggcctggatctggcctgtggccctcccacaggaggtacataggttatgtatgcagt
ttagtctcagagaagccaaccataccacactccaaaccgctagtcattaaatccgtcaca
atgagtcctgttccttgcttcaacaaacagcgcagtggctgtcggccattttgtgacgta
cttattggcgagaccaagatattttctacagctcaggagtacgagagaatgagggaacac
aggattcaagagggcaaagtggtgtttcccgtgagtgtgagtgcccaaggagatgtggtg
atttcggtctatcacatgcgttcccatgcacttcaggccaaggtaacaaacacccagata
ttccagattcagttccatactggtttcattgcccctggcaccacagtcttgaagtttatg
aagacagagctggatgcctgtgattctccagagaaatacccacagctgtttcatgtgctg
atagacattgaggttgaaagtacagagaaacaaaaagatctcaccccaccgtgggagcag
ttccccaccaaagacctgagccccaacgtgcttttctccggccatcaggaacaccaggat
gcacttgctattgcagatgaaatggagggcttggacttggaagatcctgcccagggccac
gggagttgtggaggccgagtgggcccgaatgaagaaagcgaaccgtcagatgatgaaatg
ctctccctttctagtcagcagagcaacgcgagcaatgagaaatcaaaagcagctaaaaaa
gcagagccccagcctacagcggcccctcctccagcagctgaggaagtagatctgctggga
ctggatggtgatgcagcgaaacttcctccatcctccccgcaacctccgaccaccagcacc
accacagacctgctgggggacctgtttggagctccacccacaccacagccggccagcggc
ccaacttctgctcagtccacaccgcggagatccgcaacctcctcctcgccttgtccgtca
cctcgatctggaggcactttcgacccatttgggtctgggcctgctccctcccctaagccg
caggacttcatggggtctttcttgggtccaggtaatatggggcagccagaccccttcctg
catgctgcacgatctccgtctcctacaatgcagaacatgggcatgggtcgcagttcacct
gtgccgcccactactcccactgtcaatatccagcagcagagctctacaggagcatgggaa
tggaacaaaacaccacctgcaagtggaggttttgggatgggaagtaagtccgccagcact
agcccaaccagctcagttcatggtactcccacccaccaggccaaacccaacactttagac
ccatttgcggatctgggtaacctaggagccggtctgggaggaggtggttctggattctcc
agcaagcctaccacacctactggtaccggaggagcacttccacccatgggctccccccag
cgtcctgctccctctccccagcacactgcctctggaggctggcatcctggcacaggcttc
ccctcatggcagcccggaggtggggctcagtggcagccacaggcccagggtgcacagcac
cagaccccacctaaagcaccaggaccctctatgccccacacttctccacagaacagaccc
aactacaacgtcagcttctccagcatgggtggagcttcgccaagagccacaggggcaaag
gaacagcctaacatgggaaccagaccaaaggttttggatgctaactttgatgacctactc
tcgggccagggctttgctggcattaaggagaggaaagggccaaaaactatagcagaaatg
agaaaagaagagatggcaaaagaaatggacccagagaaactcaagatcctggactggatt
gagggtaaggagaggaacatcagagcattgctatccacaatgcacacggtgctttgggag
ggagaaacgcgctggaaacctgtaggcatggctgaccttgtcacaccagagcaggtgaag
aaggtctaccgcaaagctgtgctggtagtgcaccctgacaaggctacaggaaagccctac
gaacaatatgccaagatgatttttatggaacttaatgatgcctggtcagaattcgaaagc
caaggacagaaagcactgtactaa
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