Garra rufa (doctor fish): 141347284
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Entry
141347284 CDS
T11039
Symbol
pars2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141347284 (pars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141347284 (pars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141347284 (pars2)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
141347284 (pars2)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
141347284 (pars2)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141347284 (pars2)
Prokaryotic type
141347284 (pars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
DUF515
Motif
Other DBs
NCBI-GeneID:
141347284
NCBI-ProteinID:
XP_073708397
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All DBs
Position
12:complement(26572322..26575858)
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AA seq
479 aa
AA seq
DB search
MELFMHHYHRKLPTLLSRTLFNTLKRSHIICAIHTSPLLSIPSKPTIPPPLVSHIFQPSN
FREGQVGGDLTCRSQRLMLQTGLIHPSNPGCFYYLPVALRSMEKLVRLIDEEMHAIGGQK
IDMPALCSAELWKKSGRWELMGKEMFRLLDRHNGEYCLAPTHEEAVTELFASQTMSYKKL
PLLLYQVTRKFRDEQKPKFGLLRGREFYMKDMYSFDITEEAGLQTYHSVCQSYGRIFDRL
GLKWVQVQAATGNIGGTLSHEFQLPADIGEDQLLICGNCGFSANIETMDPGQTECTKCQT
GTLTESKGIEVGHTFYLGTKYSQAFKASFVNASSVPAVAEMGCFGLGVTRILAASIEVMS
SKDAIRWPGLIAPYQVCVLPPKKGSKEKDATLVAEELAQSLGNSLPNLRGEVVLDDRVQM
TIGKRLKDAKILGYPYVVVVAQKALEDLPTFEVICQQSGETMFLSKEGLVDILSKVETI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtttatgcatcactatcatcgcaagctcccaaccctcctgtccaggactctc
ttcaatacattaaagagaagccacattatttgtgccattcacacctctcccctcctctcc
atcccatccaaaccaactatcccaccaccgctcgtgtctcatatcttccagccgtccaac
ttccgagaaggtcaggtgggaggtgacctgacatgccgcagccagagactgatgctgcag
acagggctaatccatccctccaaccctggctgcttctattacttaccagttgctctgagg
tccatggagaagctggttcggcttatagatgaagagatgcatgcgatcggcggacagaaa
attgacatgccggcactatgcagtgcagaactttggaagaagagtggccgctgggagctt
atggggaaagagatgttccggttactggatcggcacaatggcgaatactgcctcgcaccg
actcatgaagaagcagtcacagagctttttgcttcccagacaatgtcctacaagaagctg
ccacttctgctgtaccaggtaacacgcaaattccgtgacgaacagaaaccaaagtttggg
ctcctgcgtggccgggaattctacatgaaagacatgtattcatttgacattaccgaagag
gctggtcttcaaacataccactctgtctgtcaatcttatggacgaatatttgaccgtctg
ggcttgaagtgggtgcaggtacaggctgccaccggcaacataggaggcacactttcccat
gaatttcagctgccagcagacattggcgaagaccagttacttatttgtggaaactgtggc
ttctctgccaacattgaaaccatggatccagggcagactgagtgcacaaagtgtcaaaca
ggcacactgacagaatccaaaggcatcgaagtgggacacactttttacctcggcacaaaa
tattcacaggcatttaaggcctcattcgttaatgcatccagtgtgcctgcagtggctgag
atggggtgttttggacttggcgtcactcgaatactagccgcttctatagaggtgatgtca
tctaaggatgctattcgctggcctgggttgatcgctccttatcaagtctgtgtcctgcca
cccaaaaagggcagtaaagaaaaagatgccacactagtggctgaggaactggcacaaagt
ttgggaaacagtctacccaacttaagaggagaggtagtactggatgacagggttcagatg
accattggaaaacgattgaaggatgctaaaattttagggtatccgtatgtggtggtagta
gcgcagaaagctctagaggatctgcccacctttgaagtgatttgtcagcaaagcggagag
accatgttcctaagtaaagaggggctagtcgatatcttaagtaaagttgaaactatctaa
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