Garra rufa (doctor fish): 141347303
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Entry
141347303 CDS
T11039
Symbol
cacng5a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 5a
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141347303 (cacng5a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141347303 (cacng5a)
04261 Adrenergic signaling in cardiomyocytes
141347303 (cacng5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141347303 (cacng5a)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141347303 (cacng5a)
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Gene cluster
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
Claudin_3
DUF4064
DUF716
Motif
Other DBs
NCBI-GeneID:
141347303
NCBI-ProteinID:
XP_073708415
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Position
12:15905700..15934739
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AA seq
289 aa
AA seq
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MSLCGRKALTLLSSVFAVCSLGLLGIAVSTDYWLYLEEGVILPLNQSTEIRMSLHSGLWR
VCFLAEPPAPATVLPTGKSGEEKGRCFTIEYVMPMNVQMTSESTASVLKMIRSATPFPLV
SLFFMFIGFVLSNIGHIRPQRTILAFISGIFFILSGLSLVVGLVLYISSINDEMLNRTKT
NEAYFSYKYGWSFAFAAVSFLLTEAAGVMSVYLFMKRYTAEEMYRPHPGFYRPRLSNCSD
YSGQFLHPDARARGRSPSDISSEASLQMNSNYPALLKCPDYDQMSSSPC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgtggcaggaaggcactgacactcctcagcagtgtgtttgctgtgtgcagt
ctggggctgctgggtattgccgtcagcactgactactggctctacctggaggagggggtc
atcctgcctctcaatcagagcactgaaatccgtatgtctctccattcaggactctggagg
gtctgttttcttgcagaaccaccagctccagcaacagtgttaccaactggtaaatcagga
gaggagaagggacgctgctttactatagagtatgtgatgcctatgaatgttcagatgacg
tcagagtctacagccagcgttctgaaaatgattcgctctgctactccttttccgctggtc
agtctatttttcatgttcattggctttgtgctaagtaatattggacacatccgccctcaa
cgcactattctggccttcatctccggaatcttctttatcctgtcaggtctgtccctggtg
gtgggtctggtcttgtatatatccagtattaacgatgagatgctaaacagaacaaaaaca
aacgaagcctatttcagttataaatatggctggtcttttgcttttgctgcagtctccttc
ctgcttactgaggcggcaggtgtaatgtctgtctacctttttatgaagcggtacactgca
gaggagatgtacaggccacacccgggtttctatcgacctcgactcagcaactgttctgat
tattctggtcagttcctgcatccagatgccagggctcgtggacgcagcccctcagacatc
tccagtgaagcatccctccaaatgaattcaaactaccctgccctcctcaagtgtcctgac
tatgatcagatgtcctcatcgccctgttga
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