Garra rufa (doctor fish): 141347325
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Entry
141347325 CDS
T11039
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00600
Sphingolipid metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141347325 (smpd2b)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
141347325 (smpd2b)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
141347325
NCBI-ProteinID:
XP_073708433
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All DBs
Position
12:complement(42650628..42668102)
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AA seq
427 aa
AA seq
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MTTSAPIRFRVFSLNCWGIHFLSKNCKERFVMIGDLLNQEQIDIALLQEVWCEKDFLYLK
KKLINVYPFSHYFKSGFIGSGLAVFSKHRIHDAFLYRFSLNGYPYMAQHGDWFGGKGVGK
ILLNINGLNIHVFVTHLHAEYCREKDSYLPHRVVQAWEMQQFIRHTSAGADVVILGGDLN
MHPDDLGTRLLRNHTGLQDSFSEAANFDGCEEGHTHISENPYTNTDSLVPFGGGIRIDYI
LFKGSGEVDVSCESLSTTKGPVPEHPFPYSDHEALTAEFLFTPTTKGNGCSKRQSSCVSD
KLPELVNTVNEARTEVKVGLHCAERMRHTAARTGIMGLVLLVLELAIAAVPLFALGAEQP
FPKASFYLLGALCFAILLTTLMLYVFYSMEVKALQGTEDQMRLALCSLQEQLKESPRVYP
QTICEVH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcagcaccaatcagattccgcgtcttctctctcaactgctgggggatccac
ttcctcagtaagaactgcaaagagagatttgttatgatcggagacctgctgaatcaggaa
cagattgatatagcgttactacaggaggtctggtgtgaaaaagactttctgtatttaaag
aaaaagcttataaatgtctatccattttcccattattttaaaagtggatttatagggagc
ggattggccgtgttttctaaacatcgaatccatgatgcatttctgtacagattctcattg
aatggatatccatacatggctcaacatggcgactggtttggtggtaaaggagtcgggaag
atcttgcttaacatcaatgggctgaacattcatgtttttgtcactcatctgcatgcagaa
tattgcagagagaaagactcttatctcccacacagagtggttcaagcctgggagatgcaa
cagttcataaggcacactagtgctggagcagacgtagtgattctgggtggagatctgaac
atgcacccggacgatctcggcaccagactgctgagaaaccacacaggacttcaggacagc
ttcagtgaggccgctaactttgatggatgtgaggaaggacacactcatatatctgaaaac
ccttacacaaacacagatagccttgttccatttggaggaggaatccggatagactacatc
ctgttcaagggatcaggggaagtggatgtgagctgcgagtctttgtccaccactaaaggt
cctgttcctgaacatccctttccttactctgatcacgaggctctcacagcagagttcctg
tttacaccaactacaaagggaaacgggtgctcaaagagacaatctagctgtgtttcagac
aagcttcctgagctggtcaacacagtcaatgaagctcgtactgaagttaaggtgggtctc
cactgcgctgagcggatgcgccacaccgcggcacgtacaggcatcatgggtcttgtcctg
ttagtgctcgaactagcaatcgccgctgtcccattgtttgctctgggagccgaacagccc
tttcccaaagcctctttctacctgctgggggcgctgtgctttgccatcctccttaccaca
ctgatgctgtacgtcttctacagcatggaggtgaaggcgctgcaaggcaccgaggaccag
atgagactggcactatgtagccttcaagaacagcttaaggagtcccccagggtttatcct
cagaccatctgcgaagtccactag
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