Garra rufa (doctor fish): 141347542
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Entry
141347542 CDS
T11039
Symbol
pex5la
Name
(RefSeq) PEX5-related protein
KO
K13342
peroxin-5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141347542 (pex5la)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141347542 (pex5la)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141347542 (pex5la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_8
TPR_11
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_20
TPR_12
TPR_9
ANAPC3
TPR_15
CENP-Q
DUF4315
Motif
Other DBs
NCBI-GeneID:
141347542
NCBI-ProteinID:
XP_073708644
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All DBs
Position
12:complement(25541216..25593622)
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AA seq
562 aa
AA seq
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MVMLVSEQQESRPLLSPSIDDFLCETKCDGAARPVTSNTAVLSSSLDLLDLSEPGERRHS
KDRKSPLSSKGTPYRKKPDETELIQVDVEQSITCSRTPEKISLDSVAVPSSLDKWEELNP
HPERNGSRKWKLERRRSSKNSGEFVWSMDCKTLDTTPRNSLEVNNKVEAEAVPVTQGRLG
KDQRWGSTLLSRNQSLEEEFERAKAAVESDTEFWDKMQAEWEELARRNWLTENEQPQIPS
NVSPYEKGYYFHTDNPFKDWPNAFEEGLRKSRDGDLPNAVLLLEAAVLQDPQDSEAWLVL
GTTQAENENEQAAIVSLQRCLELHPNNLQALMALAVSLTNTGMRQEACEALLSWIRHNPK
YKHLLKTRTHLQGSPGSRRPSYPSTTSCPLLPEVKELYLDSAQHNSDMIDPDLQTGLGVL
YNLSSEFNKAVEAFNAALSVRPEDYLLWNRLGATLANGDRSEEAVEAYTRALELQPGFIR
SRYNLGISCINMGAHREAASNFLTALGLQRKSRSRQLSHQVMSGNIWAALRIALSMLDQP
ELFQAANIGDLDLLMKAFNLDM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgctggtgagtgagcaacaagagagccgtcccttgctgagcccttccatcgat
gatttcctctgcgagaccaagtgtgatggagctgcccgcccagtaacctccaacacagca
gtactgtcctcttctctggacctgctggatttgagtgagcctggtgagagaagacacagc
aaagacaggaagagccctctttcttctaagggcacaccatacagaaagaagcctgatgaa
acagagctgatccaagtggatgtcgaacagagtataacctgttcccgcacacctgaaaag
atttcattggactcagtagcagttccatcttctttggacaaatgggaagaactcaaccca
caccccgagcgaaatggtagcagaaagtggaaacttgagagaagacgttcatcaaaaaat
tctggtgaatttgtgtggtctatggattgcaagactctagacactacccccaggaactcc
ctggaggtcaataataaagtagaggcggaagccgtgccagtaactcaaggccgtttgggc
aaagaccaaaggtggggtagcacactcctgtccagaaaccagtctctggaggaagagttt
gagagagctaaggctgcagtggagtcagacacagagttttgggataagatgcaggcggaa
tgggaagaacttgctcgcagaaactggctaacggaaaatgagcaaccacagattccctct
aatgtgtctccttatgaaaagggatactacttccacacagataaccctttcaaagactgg
ccaaatgcgtttgaggaaggattgcgcaagtccagagatggagacctgcctaacgccgta
cttcttctggaagcagctgtgctgcaggaccctcaggattcagaggcttggctggtgctg
ggaaccacacaagcagagaatgagaatgagcaggcagcaattgtctccctccagaggtgt
ctggaactccaccccaacaacctccaggccctcatggccctggcagtgagcctgaccaac
acgggcatgaggcaggaagcgtgtgaggcgctgctgagctggataaggcacaaccccaaa
tacaagcaccttctaaagacccgcacacacctgcagggctcacctggctcacgaagaccc
tcctacccctccacaacaagctgccccctgctgcccgaggtgaaggagctgtacctggat
tctgcccagcacaactcggacatgatcgacccagacctgcagacaggcttgggagtgctg
tataacctcagctccgagttcaacaaagcagtggaagcctttaacgcagcgctgtcagtg
cggccggaggactacctgctgtggaatcggctgggggcgacactggctaatggagatcgc
agcgaggaagctgtggaggcctataccagagccctggagctgcagcctggattcatccgc
tcacgttacaacctcggcatcagctgcattaacatgggtgctcacagggaggcagccagt
aatttcctgacagctctcggtctgcagaggaagagcaggagtcggcagctttcccaccag
gtcatgtctggaaacatctgggcagccctgcgaatagcgctgtccatgctggaccagccg
gagctctttcaagctgctaacataggagacctggacttactcatgaaagcttttaacctg
gatatgtga
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