Garra rufa (doctor fish): 141348392
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Entry
141348392 CDS
T11039
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141348392 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141348392 (tprb)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141348392 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
141348392
NCBI-ProteinID:
XP_073708804
LinkDB
All DBs
Position
13:complement(30324453..30346585)
Genome browser
AA seq
2353 aa
AA seq
DB search
MAAVLQQILERSEISKLPKTVLTKLEKYISEQQCEVDCLKAQQEQYRVDNEQTYFDIEKR
FAESQAQFVSQTQEHQILKEDYCKLEDELKCFREKNKEQTSSYSKLESQQNEVSKAKDEL
EAEKRELVRTLERRSQEMEQQSEDLKRLNDRLVEVNAERMQLQLKLDESESTEVSIKYKE
KRMEQEKDLLQGQVTWLNTELKAKSEELLTLSRQKGNEILELQCNLNNKEDEIACLQDQV
TSLKASNENLQRQAEEMITKMREAKEQQASLEEKFSNELNANIKLSNLYKGAAADAEAKS
EELSTAVDELHKLLKEAGEAHKALEMRMAELESCKDKEITELKEKISSQEKELDNANELL
SDKHRGTSSILTEEHVTTMSPTAAAVAKIIKPGMKLTEIYTAYVETQEQLQRVKLENKRL
HKYLDDIVQEMEAKAPILKRQREEFERVQKSVSSLSAKLEQAVTEVHRLQKEADESNKRA
SLLERDNQRFEVQLADMAQQVRVLLIELEEARGNHVMREEDEVCSADVSSTSEVISQHLV
TFRNVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRSELEKYLEELQRELEQLKEKRT
QDLQKVDAVARQRDMFRMLLTQATGVTFPQGAGNEELMLTSTPRRSPSVTPTAGTPTGLV
ATAIESTESVEAKAALKQLQEVFVAYKKEKTESEKAFTEQSEKLQDQVTELRSENMKIST
QLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAAAIQQSEQTIHTLTQDLRSAAEKLSN
AESEAENLRKERNMLKMVEIRLTQEKESFQAQQLGQNMLLTNLKSIQATLERSETETRQR
LTTQIEKQEREITQLQKRLENEVEQKHLLARNQDMQLMDVKKQLETQTSQYHRTREQLSA
AQLELNNLKLQMSSREIRLMSPTVHTGLQGNEGDIEALRAQLKQAESKVEELAERLKNTT
ASMEQYKAMSLSLEESLDKEKQVTEQVRSSVQTQVEASQEQFKQLEQKLLEADKEKQSLL
EEKNKTVAAVEHELSELRKSLSSLQSEHQSALERAAVAAAQEQQAILDSQEQAKMAAEAQ
DKYEREMLLHAADVEALQAAKAQTLQAANLRQQLEEKVQSTSAQLLEARVSWEEQEKIIK
EEQSKLESRCEELQRQNTLLHEQIQTLSGQMASQLQRATTESSLNVSLTEEGKSQEQLLE
ILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVKESLNAERERMQVTAKTLAQ
HDELMKKTETMNVLMETNKMLREEKEKLEKEMQDTQDKVRKLESDIFPMQESNAELSEKS
GMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRMHSERETHVKRIQQLVDETNRL
KAEAVRSSGSLTMLQSQVQNLRENLGKVMVERDNLKKDQEAKNLDIQEKLKTITQVKKIG
RRYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQELQALKESLNQSENKTRELEGRL
ENLNRTVGERDAEARSAQEQAARLQAELSRLRQELQEKSSQEERLKQQLTEKEERTKKAI
LMAKQKISQLTGVKGQLQKENEELKQQKEELDVRVSALKSQYEGRLSRQERELRDLREQQ
ERHGEQRDEPPEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLAA
TPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSEAPLEHVT
VYGSASGSVRSTSPNVQTTLAQPLLNVQQQNQATAFIQPTQQQTQPPAEPSNQEPPAVVM
LPTSQLDRPLSTSTGIWSATASTSSASAVSASPSSALSKRPREEEQESMSADTQSQDEPN
DTPICKRVRIHRVGLEEEMLAEDSTEAESVVPGESQEAPDAGQELESYATLEEMDEEPGP
SQSVPGDRLLPHPSEIHRSPEEPDHHVIVIVSDTDSEGDHEEESEEEEEEEQDYEEEDEE
EEEEDDDDEEDGGIGEEGEDSNEGSGSRDGNEAYEGDDTEGPDPTDPGTETEESLGATDS
TQRMADSQSFETSTLDVFEAPVTSSAPRPHPQSPRRPQHPLPPRLNILPPPIQELGPPSQ
VQRLPVRRQSVGRGLQLTSGMASSAQHFYEDDDRMVPSTPTLPLPRSDGFAEAIHSPQVA
GVSRFRFGPSDDLPQTSSSHSDLGQLPSQGLGMYESSVFLGAHEEESGGRSVPTTPLQIS
APVTVLSDTVASEGIEHASQSVPMVSTSTPGLSAPAGPSGVEDRDDMFMDAGDSAEASLE
AVSQTEAEEAAQPSDEASLPSTSQEPSSSSADTSSSQPPKVRTGSGRQWTSGRGSRSFVK
RDGVTSVRGRFAR
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatattggagcggtcggagatatcaaaacttcccaaaact
gtcttgacgaagttagagaagtatatttctgaacagcagtgtgaagttgattgtctgaag
gcacagcaggagcaatatcgtgtggataatgaacaaacgtattttgacatcgagaagagg
tttgcagagagtcaggctcagtttgtgtcccagacgcaagagcatcagatactgaaagaa
gattactgcaaactagaggatgagttgaaatgctttcgagagaaaaataaggagcaaacg
tcttcatacagcaaactagaatcacaacagaatgaagtttctaaagccaaagatgagctt
gaggcagaaaaacgagagcttgtgcggacattggaaaggagatcccaggagatggaacag
caaagcgaggacctgaagcgtcttaatgacagattggtggaagtcaatgcagagagaatg
cagcttcagctcaagctggatgagtcagaatccactgaggtttcaatcaagtataaagag
aaacgaatggagcaggagaaagatctactccagggtcaggtgacctggctgaatactgag
ctgaaggccaagagtgaagagctgctgacgctttccagacagaaaggcaatgagatcctg
gagctccaatgcaaccttaacaacaaggaggatgaaattgcctgccttcaagatcaggtg
accagtctgaaggcgtccaatgagaaccttcagaggcaagcagaggagatgatcaccaag
atgagagaggcaaaggaacagcaagccagtttggaggagaagttcagtaatgagctcaat
gccaacattaaactttcaaatttgtataagggagctgcagctgatgcagaggccaaaagt
gaggagctaagcacagctgttgatgaacttcacaagctgcttaaagaagctggagaggca
cataaagctctggagatgaggatggcagagctggagagttgtaaggacaaagaaatcact
gaactgaaagagaaaataagcagccaggagaaggagctggacaatgcaaatgagctgctg
tctgacaaacacagaggaacttcttcaattcttacagaggagcatgtgaccacaatgtct
cccacagcagctgcagttgccaaaatcatcaaaccaggcatgaaacttacagagatatat
acagcttatgttgagactcaagaacagttacaacgggtgaaactagagaacaaacgactg
cacaaatacctggatgacattgtgcaggagatggaagcaaaggcacctattctgaagagg
cagagagaggagtttgagcgcgtgcaaaagtctgtttccagtctctctgctaaactggag
caagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaagcaacaaacgcgca
tctttgttggagagagataaccagaggtttgaggtgcaacttgctgacatggctcaacag
gtgcgggtcctccttattgagctggaggaagcacgtggtaaccatgtgatgcgtgaagag
gatgaggtgtgttctgcagatgtgagcagcacttcagaggtgatttctcaacacctggtc
accttccgcaacgttgaagagctgcagcagcagaaccagcgactcttagtagcactcaga
gacctcagtgaggaaaaggagaaggatgagttggagggagacaccatgaaacgcagtgag
ttggagaaatatcttgaggagcttcagcgggagttggagcagctgaaggaaaagagaacg
caggatctgcagaaggttgacgctgtggctcgacaaagggatatgttccgcatgcttctg
acccaggccactggagtcaccttcccacagggtgctggtaatgaggagcttatgctgacc
tccacccctcgccgttctccatctgtcacacccactgcaggcacccctacaggactggtt
gcaacagcgatagaatccactgagtcagtagaggccaaggctgcactgaagcagcttcag
gaagtcttcgtggcctataaaaaggaaaaaacagagtctgaaaaagcctttactgagcaa
agcgagaaattgcaggatcaagtgactgagctccgctctgaaaacatgaagatctccaca
cagctggagttcacctctaaacggtatgagatgctccaggataacgttgagggctaccgt
aaggagattgcctctctgaatgagaagactcagaaacaggctgcagcaattcagcagagt
gaacagaccatacacaccctcacccaggacctgcgatcagcagctgagaaactctccaat
gctgagtctgaagcagagaacctgcgtaaagagagaaacatgttgaagatggtggagatc
agactgacccaggaaaaagagtccttccaggcccaacagcttggccagaacatgctgctg
accaacctcaaatcaatacaggcaactctagagcgctctgagacggagaccagacaacgg
ctgactactcagattgagaagcaggagcgagaaatcactcagctccagaagagacttgag
aatgaggtggaacagaagcacctgctggcacgcaatcaagacatgcagctgatggatgtt
aagaagcagctggagacacagacttcccagtatcacaggacaagagaacagcttagtgct
gcccaactcgagcttaataacctaaaactgcagatgagtagcagagagatccggctgatg
tcccctacagtacatacaggcctgcagggcaatgagggtgatatagaggctctgcgtgcc
cagctgaagcaggctgagagcaaggtagaagagctggctgaacggctgaaaaacaccact
gccagcatggagcagtataaggccatgagtcttagcttagaggagtccctggataaagag
aaacaggtaacagagcaggtgcgatcatctgtgcaaacccaggtggaggcatctcaggaa
cagtttaaacagctggagcagaaactcctagaagcggacaaggagaagcagagcttgctg
gaagagaaaaacaaaactgttgctgctgtggagcatgagttgagtgagctgaggaaatct
cttagcagcctgcagtcggagcaccagagcgccctggaaagagctgctgttgctgctgca
caggagcagcaggccatccttgacagtcaggagcaggctaagatggcagctgaggcgcag
gataagtatgagagggagatgttgctgcatgctgccgacgtggaagcactgcaggctgcc
aaagcacagactctgcaggcagctaatctcagacagcagctggaggagaaggttcagagc
accagcgcacagctgctagaggctcgcgtttcttgggaagagcaagagaagatcatcaag
gaggagcagtctaagctagagtctcgctgtgaggagctgcaaaggcagaatacactcctt
cacgagcagatacagactctgagtggacaaatggccagtcagctgcagcgagccaccact
gagagttcactcaatgtctctctgacagaagagggcaagtctcaggagcagctcctggag
atcctaaggtttgtgcgacgtgagaaggagattgcagaatctcggtttgaggtggtccag
ggtgagagtctgaggcacaggctgagagtggaacatctggagagagagctgaaggacgta
aaggagagtctgaatgcggagagagagaggatgcaggtgactgcaaagacattggcccag
catgatgagctgatgaagaagacggaaacaatgaatgtgctaatggagaccaataagatg
ctgagggaggagaaggagaaactggaaaaagagatgcaggatactcaagacaaggtgcgt
aaattggagtcagacatcttccccatgcaagagtccaatgcagagctgagtgagaagagt
ggtatgctccaggcagagaagaaacttctggaagaagatatcaaacgctggaaagctcgc
actcagcacctggtgagccagcagaaggacactgacccagaggagtacaagcggatgcac
tctgagagagaaacgcatgtcaaacgcatccagcagcttgttgacgagactaatcggctc
aaagctgaagctgtcaggagcagtggctctttgactatgctgcaatcccaggtgcagaac
ctaagagagaacttagggaaagtgatggtggagagggacaacctgaagaaagaccaggag
gccaaaaatctggacatccaggagaaactgaaaaccatcacacaagttaaaaagattgga
cgacgttacaaaacccagtacgaagagctcaaggttgaatatgacaagttggtagctgca
gcagcatctgcaccggcccaagatcaagaggcacagcaggcatcagctcaagaacttcag
gccctcaaagagtccctcaaccaatcagagaacaagacaagggaactggaaggacgtttg
gagaatctcaatagaactgtaggtgagcgggacgcagaggcacgcagtgcacaggaacag
gccgctcgtctacaggcagagctatcgcgtctccggcaggagcttcaggagaaatcgtct
caggaggagcgactcaaacagcagctgactgaaaaggaggagaggaccaagaaggccatt
ttaatggctaagcagaagatcagtcagcttactggtgtgaaaggtcaactccagaaagaa
aatgaagagctgaagcaacaaaaagaggaactggatgtgcgagtgagtgcactaaagtct
cagtacgaggggcgtctgagcagacaggaaagggagctgcgagacctccgcgagcagcag
gagagacatggagaacagagagatgagcctccagagcagggatccagcaagacccaggag
ccgcaaaggacaacggaacagcgacagatctctctgaagtccacaccagtggcagaaaga
ggaagtgcaagcacttcagagcctccaactgccaacataaagcccacaccactggcagca
acccccagcaagcctccagccattccaggaaacaaatccaccccgagggccagcatcaaa
cccatgatcactcctgctccagtgcccaccccgacacccactgccacagtcatgccaacc
acacaggtggagagccaagagcccatgcagtcatccgaggccccgcttgagcatgtgact
gtgtatggcagtgccagcggttcagtgcggtctaccagccctaatgttcagaccaccctg
gctcaacctctgctgaacgttcaacagcagaaccaggccactgcgttcatccagcccact
cagcaacaaacccaaccccctgctgaaccatccaatcaggaacctccagccgttgtaatg
ctgccaacctcacagttagacaggcctctttctacatccacagggatatggagtgccacc
gctagcactagcagtgccagtgcagtgtccgcatctcctagtagtgccttgagcaaacgc
ccccgtgaagaggaacaagagagcatgtctgctgacacacagtcccaggatgagcccaat
gacacccccatttgcaagagggttcgcattcatagagtaggtctggaggaagagatgttg
gctgaagacagcactgaggctgagagcgttgtaccaggtgagagccaggaggctcctgac
gctggacaggagttggagagctatgctactttggaagagatggatgaggaaccaggacca
tctcagtctgttcctggagaccgacttctgccccatccctctgagatccatcgaagcccg
gaggagcctgatcatcatgtcatagtcattgttagtgacacagatagtgagggagaccac
gaagaggaatctgaggaggaggaggaagaagagcaagattatgaggaggaggatgaggaa
gaggaggaggaagatgatgacgatgaggaggatggcggtattggggaagagggagaagac
agcaatgaagggagcggcagcagagatggcaatgaggcctacgagggagacgatacagag
ggcccagatcccacagatccaggcactgagacagaggaaagtcttggagcgacagactcc
acccaacgcatggcagattctcagagctttgaaactagcacattggatgtttttgaagca
cccgtcaccagctctgcccctcgacctcaccctcaatcacccagaagacctcagcatcct
cttcccccacgtctaaacatcttacccccacctattcaagagttgggacccccttctcaa
gtccagcggctcccagttcgacggcagtcagtgggacgaggccttcagcttacttctgga
atggccagtagtgcacagcatttctatgaggatgatgacaggatggttcctagtacccct
acacttcctcttcctcgctcagatggatttgctgaagcaatccattctccccaggtcgca
ggtgtatcgcgatttcgattcggtccttcagatgacctcccacagactagttcctctcac
tcagaccttggtcagctgccatcacaaggtttaggcatgtatgagagttctgtatttctt
ggagctcatgaggaggagtcaggaggccgaagtgtgcccacaacaccactacagatttcc
gctcctgttactgttttatcagacactgttgcatctgaagggatcgagcatgcttctcag
tctgtgcccatggtgagcacctccacacctggccttagtgctcctgcaggccctagtgga
gtggaggaccgagacgacatgttcatggatgcaggagacagtgctgaagcttcacttgag
gctgtgtcgcagactgaggcagaggaagcagcccagccatcagatgaggcgagtctgcct
tccacaagccaggaaccttcatctagttctgcagacacaagcagctctcagcctcctaaa
gtcagaacgggatctgggagacagtggacaagtggtcgtggttctaggagctttgtaaag
agagatggcgtcacaagtgtaaggggacgttttgccaggtga
DBGET
integrated database retrieval system
