Garra rufa (doctor fish): 141348431
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Entry
141348431 CDS
T11039
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
141348431 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141348431 (rev3l)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141348431 (rev3l)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
141348431 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
141348431
NCBI-ProteinID:
XP_073708840
LinkDB
All DBs
Position
13:complement(19063409..19238906)
Genome browser
AA seq
3018 aa
AA seq
DB search
MFSVRIVTADYYMSNPIRELDVCYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IFVPYDGFGQETDRYLRQVAYSIDRALNVSMGNPSSNVQHIFKVVLVSGMPFYGFHMKEK
TFMKIYLYNPQMVKRVSELLQGGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAV
KFRKSTTVGEHMSNTGDSTSPWKNPCSSKLSDGELRDTMRWEDDNIPSFLIIEEVKRMSV
CELEVDAVAADVLNRLEIENQIGRNPGLQAIWDDEKQRRQEWCQSSHIDVPESQDRGFVE
FAESEQIFMKRFKEIIKENEFDVTQTGSEVDSFPELSLYPVLSPDDLPCIPASQVDVHQD
AFKDTKKHGGKDAEVAVVDEEAILSLLENSQTFLPLSQRPNQSAILDSSHNQAMVDLFEA
LADDGFTADRSRAGPQQLSGIASCIYNSDDEEAGPELEKQESELSRIMSQRWDCDMPGPY
ARQRLCMKEANESSCEDQLASSDEELYWKGNSALFTDMSIPQLDGAADENSDSSLTDKES
RTHSSLKATDKILGSRNVFPSEAVHMEPPSSAKIVIEYKHSEQQLQEDLADKNLKSEETN
EYSTGLRVNKEVPYIPPVKHPIPFNTANIPKLGAEKISVHSLCTDKNQATGLNQPDPDDS
IFGNSKLAQSIKNSTTIKNVDKNHLSILENHKRLFVCYSELMNCPTKTEMELCQNDLRRP
VIRFDQIQSPMEESQALGPQEGETGQDGKEEDVSKLKIRYEDYQENKTERTIVAQQEAHY
KFFPSVILSNCLSRPIKKQAGSKTGDGCYTLDHPEQRRSRLKLIKKKTFGQKRLSPVRTP
SPMEEEATALLSNTLGSLNQKEMYKGVEMETSDSPTIEGLSENSIEDGLADIPTRISCTK
VSSLPGSKYTLRAKRKMSYDSENRDQASSGSFKQALGQHEDLKGKDHVFSQKKRKLTKKE
PPIIIKYIIINRFKGQKNMLVKISKINADETRTVLTPEKLAQYKKLAPLKEFWPKVPEST
AVKYPLLEPKVKKCPKRKAKVNSVSKRASTSPKSRCPRAGQPRNANHAKALITLPKLPPP
WPCYNEFTDDCCTEYSDVMVELGYLSERASSPTDSTPPRCWSPTESFLESNSNLINPHND
PCLGSSYEAPKPYQRGLWDRRRTPRPKKTSATSPKRQANSTTKLVNKDSVKKEGSQRKSI
RVASGRHKKRCETIKGIVVEDGTSTSPKDKRLNEKQALRKKQVQGEKSDHSQAPYSVNTA
PITYSFDDLTPFQRPSSLKSSQEDLTVSCSGSQAEVTSTGKKSNQDVVFVFNAIASNDSQ
KDSQIVLNPCIEKSLNRILSPSTKTVGHPCSVIAYSSSYSKSQNISKDETVNKNLNKFKS
EVSDHEENTRTIQHLQSTSKTTIKSRKLQTKKKDTITTLLESVDCRSSLMPSAKSAIKAG
FHTGLTLSSHPKTEEMYVPELPSGLVVLKELLQKRQLKTGQEPHESDHVTEAMSTTCQPT
DIPKTAKSKTAHSSTSRRPRGTRTKVPKELQFKIKRNKIKQDGLKIDHQSSDDSPVFFFD
PGFDSCCSIEDSLSPELPDNYSFDINAIGQTEFSSLYSGNQFVLTDRNLPQKFLSDVSQE
AISALVGLGDRTQNVFNVDENSKHEQVWHKSGALSPELFDKPFCESGSVYPSKLSLDSEK
IFSKDWGGSLGKIHGLSHFQDFHCEKRDVLLDPEPFSPITSASFAYNGVSPNSDPLDGSS
ATPSSSPHSINSLSQLKNGCQSLKSGGTHILKPLMSPPTREEILVTLMDLDLSEATYQEP
FCSDPSDAPLKPREVGGRKLILETRLANELVEFHGDLSQNGLHFWKVAFSAMTNQTSAPA
HACKSSILTKDQNPLSGSNQKVIMLPCKCAPSREQVQLWLQAKKQYECLQSNRKQKGGQT
VVGLKQSTCDRNSPQNEDFNSPSSENHDKSLQSWEKKIEKASELQSISRNGLSLPLHISP
VEAVLPNSSPKSVKCILEMETNKGRRITSPHPPDLAILQQRPVEIKQDDNKDHEDLTDVL
QSPSMGQSQNLNETSIDDVQSKDLLSPSVFLVKHLISDVKCSYLLHSTPVHRRSYTDVDG
SSCSPIRNEDIESRSQGLHQKGNKDALRRVLLTTQMKNQLTTMNVPKRENSQIEGPSICN
SFGFKVSMQNLKDAKALHEVQHLTLISMELHARTRRDLEPDPEFDPICALFYCLSSDVPL
PNSDTTQMTGVIVIDKHCCSSAQASRSTAPFLFKSGVTGLLVTYVSDEKELFEEVTNILR
KYDPDILVGYEVQMHSWGYLLQRASTLGVDLCQQLSRVPGDAKENRFMAEKDEYGADTMT
EIHIVGRIVLNMWRIMKTEAALNNYTFENVAFHLLHQRFPLYSHRTLSDWFDHSTNLHRW
KVVDHYMSRVCGTIQLLHQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPM
NYIPVTPSTQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYCFSTCL
GHVENLGTCDEFRFGCTSLRVPPDLLYQLRNDITISPNGVAFVKSSVRRGVLPSMLEEIL
KTRIMVKQSMKAYKNDKALLRLLDARQLGLKLIANVTFGYTAANFSGRMPSVEVGDSIVH
KARETLERAIKMVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPK
PVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKNPVFDAKGIETVRRDGCPAVAKILERSL
KLLFESRDISQVKQYVQRQCLKVLEAKASMQDLIFAKEYRGSGSYRPGACVPALELTRRM
MVYDRRLEPRVGERVPYVIVYGMPGVPLIQLVRRPIEVLQDPSLRLNATYYITKQILPPL
ARICNLIGVDVFSWFHELPRVQKAWSSVGGGGEEGTRKGTISQYFTTLHCPVCDELTQLG
VCEHCRAEPQHVAVYLHQDLRLWESQQDQLLKVCRSCSGTAERQVPCVSLDCPILYKLSR
VNRHLSRGPYIRQLLEQF
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgtgcggatcgtcacggcggattattacatgagcaatccgatcagagagctg
gacgtatgttactctgagttcagagagagcgatgtcaagaaagtgcccgtggtgcggatc
tttggggccacaccagcaggccagaagacatgtcttcatctgcatggtgtgttcccatac
atctttgtgccgtatgatgggtttggacaggaaacagatcgttaccttcggcaggtggcc
tacagtatcgacagagccctaaacgtcagcatgggaaatccctcatctaatgtgcagcac
atctttaaagtggtcctggtatctggcatgcctttctatggattccatatgaaagaaaaa
acctttatgaagatttacctgtacaacccacagatggtcaaaagggtgagtgaactcctg
cagggtggagctgtaatgaataagagttttcagccccatgaagctcatattcccttcctg
ctgcagctctttattgattacaacctctacggcatgaacatgatcagccttgctgcggtt
aagtttcgaaaaagcacaacagtaggagagcatatgtcaaatacaggggatagcaccagc
ccatggaagaatccctgttcgtctaaactcagcgatggcgagctgagagatacaatgcgg
tgggaggatgacaacataccaagttttctgataatagaggaggtgaaacggatgagtgtg
tgtgagctggaggttgatgccgtggctgctgatgttcttaaccgtctagagattgagaat
cagattgggagaaaccctggtctccaggctatctgggatgatgagaaacagcgacgacag
gagtggtgtcaaagctctcatattgacgtgcctgaatcacaagatcgaggctttgtagag
tttgcagagagtgaacaaatcttcatgaagagattcaaggaaattatcaaggaaaatgaa
tttgatgtgactcagactgggtctgaagttgactctttccctgagctctcactctatcct
gtgctgagcccagatgacttgccttgcatacctgccagccaagtggatgtgcatcaagat
gcatttaaagacacaaaaaagcatggtgggaaagatgctgaagtggcagttgttgatgaa
gaggctattttgagtttgttggaaaacagtcagaccttcctccctctctctcagagaccc
aaccaatcagcaatacttgacagcagtcacaaccaggcaatggttgatctgtttgaagca
ttggctgatgatggatttacagccgacaggtccagagcagggccccagcagctgtcaggg
attgctagttgtatctataacagtgatgacgaggaagctgggcctgagctggagaaacaa
gagtcagagctcagtagaatcatgtcacaaagatgggactgtgacatgccaggaccctat
gctaggcaaagattatgtatgaaagaagcaaatgaaagctcctgcgaagaccagctggcc
tcatcagatgaagagctttattggaagggaaacagtgctctctttactgatatgtccatt
ccacaattagatggagctgcagatgagaatagtgattcatcactaacagacaaagagtcc
cggacacactcatctttaaaagcaacagacaagatccttggtagcagaaatgtttttcca
agtgaagctgttcatatggagcccccatcctctgctaaaattgttattgaatacaaacat
tctgagcagcaactccaagaagatttggcagataagaatttaaaaagtgaagagacaaat
gaatattcaactggattaagagttaacaaagaggtaccatatattccaccagttaagcac
ccaatcccttttaacacagcaaatatacctaaacttggtgctgaaaaaataagtgtgcat
tctttgtgcacagataaaaaccaagccactggccttaatcagccagatcctgatgattca
atttttggaaactctaagcttgcccagagcattaaaaattctaccactattaaaaatgtg
gacaagaaccacttatccatcctggagaatcacaagaggctctttgtatgttactctgag
ctgatgaattgccccaccaagactgaaatggaactctgtcaaaatgacttgagaagacct
gtgatacgttttgaccagatacaaagccctatggaagagagccaagctttgggccctcaa
gaaggtgagacggggcaggatggaaaagaggaagatgtcagcaaactgaaaataagatat
gaggattaccaagaaaataaaactgagaggaccattgtggcacaacaggaggcacactac
aaatttttccctagtgttattttgtccaactgcctgtccagacccatcaaaaaacaggct
gggagcaagactggggatggttgctataccttagaccatcctgagcagcgaaggtcaagg
ttaaagttgatcaaaaagaaaacatttggtcaaaaaaggttaagtcctgtgaggactcca
tctcccatggaagaggaagccacggcacttctttccaacactctaggctcccttaaccag
aaagaaatgtataagggggttgaaatggaaacttcagattcaccaactattgaaggattg
agtgagaactcaatagaggatggacttgcagatattcccaccagaatctcttgcaccaag
gtgtccagtttgccgggtagcaaatataccttgcgggcaaaaaggaaaatgagttatgac
agtgaaaatagagatcaggcaagttctggttctttcaaacaagctttggggcaacatgaa
gaccttaaaggcaaagatcatgtctttagccaaaaaaagaggaaactgactaaaaaagag
ccgccaatcatcattaaatatataatcattaacaggttcaaaggtcagaagaatatgtta
gtgaagatttccaaaattaacgctgatgaaactcgcactgttttaacaccagaaaagctt
gcccaatacaaaaagcttgctcctctcaaagaattctggcctaaagtgccagagtctaca
gcagtgaagtacccactacttgagccaaaagtaaagaaatgtcccaaacgaaaggcgaaa
gtcaactcagtgtcaaagagggccagcacttctccaaaatctaggtgtccacgagctggt
cagcctagaaatgcaaaccatgcaaaagcattgataactttaccgaaattaccccctcca
tggccttgttataatgagttcactgatgactgctgtacagagtattctgatgtgatggta
gagttgggttatttgtcagaaagagcctccagtcctactgattcaaccccacctagatgt
tggtctcctactgagtcctttctggaatcaaattcgaatctcataaacccccataatgat
ccatgtctaggttcatcctatgaagctccaaaaccataccaacgaggtctttgggataga
agacgaacacccaggcctaaaaagacttctgctaccagcccaaaaagacaagcaaattct
acaacaaagttggtaaacaaagattcagtaaaaaaggagggttcacaaagaaaaagtatt
cgagtggcttcagggaggcataagaaacgttgtgaaactattaaaggaattgttgttgaa
gatggcacgtctacctctccgaaagacaaaaggctgaatgagaagcaagcactaagaaaa
aagcaggtccaaggtgagaagagtgatcattcacaggctccatattcagttaacactgca
cctattacttactcatttgatgacctaactcctttccaacgtccaagttctctaaaaagc
agtcaagaagaccttactgtcagttgttcaggctctcaagcagaggtcaccagcactggg
aaaaaatccaatcaagatgttgtttttgtcttcaatgccattgcctcaaatgactcacaa
aaagactcacaaattgtcctcaatccatgtattgaaaaatctctgaatcgtattctttcc
ccatccaccaaaactgtgggacatccatgttcagtcatcgcatacagcagttcttattca
aaatcacaaaatataagtaaagatgagactgtcaacaaaaatctcaataaattcaaatca
gaggtctctgaccatgaagagaacaccagaaccatacagcatttgcaatcaaccagcaaa
acaaccataaaatcaagaaaactgcaaacaaaaaagaaagataccataactactttattg
gagtctgtcgattgtagatcctcccttatgccctcagctaagagtgcaattaaagctgga
tttcacacaggtctcacattgtcctctcaccctaaaactgaagaaatgtatgttcctgag
ttgccttctgggctggttgtcttgaaggagcttctccagaagaggcaacttaagacagga
caggagccacatgaaagtgatcatgtgactgaggctatgtctactacctgtcaacctact
gatattcccaaaacagccaaatctaaaacagctcattcatcaacatcaagaagaccaagg
ggtacaagaactaaagtgccaaaagagttacagttcaaaatcaaaagaaataaaattaaa
caggatggtttgaaaattgaccatcagtcatctgatgacagtcctgtgtttttctttgat
cctggctttgacagctgttgctctattgaggatagcttgtccccagagctcccagacaat
tacagctttgatatcaatgccattgggcaaacagagttctccagtctttattctggtaac
cagtttgttttaactgataggaacttgcctcagaaattcctcagtgatgtcagtcaggag
gcaatcagtgcccttgttggattaggggacaggacacaaaatgtgtttaatgttgatgag
aacagcaagcatgaacaagtctggcataaatctggggctcttagtccagaactctttgat
aagccattttgtgaaagtggcagtgtttaccccagtaagctatctcttgattcagaaaag
atatttagtaaagattggggtggctctttaggtaaaatccatggcctcagccactttcag
gactttcactgtgaaaagagagatgtcttgcttgacccagagcccttttcccccattact
tctgcttcttttgcttataatggtgtttccccaaatagtgatcccctagatggcagttca
gcaacaccaagcagttccccacattccatcaactcgctgtcccagctgaaaaatggatgt
cagagtttaaagagtggaggaactcacattctcaaacctctcatgtcaccgcctactcgg
gaagaaatcctagttactctgatggatctggacctctcagaagccacctaccaggaacca
ttctgcagtgacccatcagatgcacccttgaagccaagggaggttggtggtaggaagttg
attttggaaaccaggctggccaatgaactagttgaatttcatggagacttgtctcaaaat
ggcttacatttttggaaagttgcattttcagcaatgacaaatcaaacctctgcaccagcc
catgcttgtaaatcctcaatattgaccaaggaccaaaacccactttctggcagtaatcaa
aaagttatcatgcttccctgcaaatgtgccccaagccgagaacaggtgcagctctggctg
caggccaaaaaacagtatgagtgccttcagagtaataggaaacaaaagggtggccagaca
gttgtgggacttaaacagagtacatgtgacaggaactcacctcaaaatgaggactttaat
tcaccttcctcagagaatcatgataaaagccttcagagttgggagaaaaaaattgaaaag
gcttcagagttgcagagtatcagtaggaatggcttaagtttgccacttcatatttcacca
gttgaggcagttttacctaacagtagccctaagagtgtgaaatgtatcttggagatggaa
acaaacaaaggtcgtcggatcacttctccacatcctcctgatcttgcaatcttgcaacaa
aggccagttgagattaaacaagatgacaataaggaccatgaggatttgactgatgtatta
caatcccccagcatgggccagtctcaaaatctcaatgagacttcaattgatgatgtacaa
tcaaaggatctcttgagtccatcagtttttcttgttaaacacctgatttctgatgtcaaa
tgctcttacctgctccatagcacacctgtccaccggagaagctacacagatgtcgatgga
tctagctgcagtccaataagaaatgaagacatagaatccagatcacaagggctacatcaa
aagggtaacaaagatgctttacggagagttttgcttaccacacaaatgaagaatcagctt
accactatgaatgtacctaaaagagaaaactcccagattgagggaccatcaatctgtaat
tcatttggctttaaagtcagtatgcagaacttgaaggatgccaaagcattgcatgaggta
cagcacctcacactgataagcatggagcttcatgcaaggactcgtcgtgaccttgagcct
gaccctgaatttgacccaatttgtgctttgttctactgcctcagttctgatgtccctctc
ccaaattctgacactacccagatgacaggtgtcattgtcattgataaacattgttgttct
tcagctcaagcctccaggagcacagcaccctttctttttaaatctggtgtgacgggactg
ctggtgacatatgtcagtgatgagaaggagctttttgaagaggtcacaaacattcttaga
aagtatgacccagacattctggttggatatgaggtccagatgcactcttgggggtaccta
ctgcaacgtgcatcaacgcttggtgtggacctgtgccagcaactctctcgtgtcccagga
gatgcaaaagaaaaccggttcatggcagagaaagacgaatatggtgcagacactatgacg
gaaatccatattgttggacgcattgtcctcaacatgtggagaattatgaagactgaggct
gcattgaataactacacttttgagaatgtggctttccacctcctgcatcagcgctttcct
ctttacagccatcgcactctctctgactggtttgaccacagcacaaacctgcacaggtgg
aaagtggtggatcattatatgagccgtgtgtgtggcacaatccagttgctccaccagcag
gatattattggaaggacaagtgagctggcacgtgtgtttggaatccagttctaccatgtg
ctaaccagggggtcacagtaccgtgtggaatcaatgatgttaaggattgcaaagccaatg
aattacattccagtgactccaagcacacagcagcgtgcccaacaaagagccccacagtgc
attccgcttgtcatggagccagagtcgcgtttctatagcaactctgttattgtgttggat
ttccagtccctgtatccatccatcatcattgcctacaattactgtttctccacctgcctt
ggacatgttgagaatcttggaacgtgtgatgagttcagatttggttgtacatctctcaga
gtccctcctgaccttctttaccagctcagaaatgacatcacgatttctcccaatggtgtt
gcatttgttaagtcatcagtgcggaggggtgtcctgccaagtatgctggaggagattttg
aagacgaggatcatggtgaagcagtctatgaaagcttacaaaaacgacaaagctctatta
cgcctgctggatgccaggcagcttggccttaaacttattgctaatgtcacatttggttac
actgctgccaacttctcaggacgtatgcccagcgttgaggtaggtgacagcattgtgcac
aaggcccgagagactttggagagagccataaagatggtcaatgacacaaagaagtgggga
gcgcgtgttgtctatggagatacagacagtatgtttgtgttgttaaaaggagcaaccaag
gaacaggcatttaagattggtaatgaaattgcagaagctgtcactgccaccaaccctaaa
cctgtcaaattaaagtttgagaaggtgtacctcccatgcgtgttacagactaagaagcgt
tatgttggatacatgtatgagagcttggatcagaaaaacccagtatttgatgccaaaggc
atagaaaccgtacgtcgtgatggctgccctgctgttgccaagattctggagcgatctctg
aagctgctttttgagtcacgagacatcagccaggtgaagcagtatgtccagcggcagtgt
ttgaaggtgctagaggccaaagctagcatgcaggacctcatttttgccaaagagtaccgt
ggcagcggatcgtaccgaccaggggcctgtgtccctgctctggaactcaccaggcgtatg
atggtgtatgatcgacgtttagagccacgtgtgggtgagcgtgtgccatatgttattgtg
tacgggatgccaggagtgccgcttatacagctggttcggcgtcctatagaggtactgcag
gaccccagtctgcgcctcaatgcaacctattacatcaccaagcagatcttgccaccactc
gcacgaatttgcaacctgattggagtagatgttttcagctggttccacgagttgccaagg
gtacagaaggcctggagctctgtgggtggaggtggggaggagggcacaagaaaaggcacc
atctctcagtactttacaacgctgcattgcccggtttgtgatgagctgacacagctagga
gtgtgtgagcattgtcgggctgaaccccaacatgttgctgtttacctacaccaagacttg
cgactttgggaaagccagcaagaccagctcctaaaggtatgtagaagttgcagtgggact
gcagagcgtcaggtgccatgtgtctcattggactgccctatactctacaaattgtctcgt
gttaatcggcatctttcccggggaccatatattcgccagctgctggagcagttctga
DBGET
integrated database retrieval system
