Garra rufa (doctor fish): 141348472
Help
Entry
141348472 CDS
T11039
Symbol
tdrd6a
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
grf Garra rufa (doctor fish)
Brite
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141348472 (tdrd6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
141348472
NCBI-ProteinID:
XP_073708869
LinkDB
All DBs
Position
13:31651524..31661683
Genome browser
AA seq
2103 aa
AA seq
DB search
MCSIPGLPSTGSNVPVLITRVHLNPACVLVEFWGNFDQDRKFAYQQLKKEIQYPREGFCE
TDGNPGDLCLVRVYETWYRARIVTRDTDEYSVFLIDEGRTLCATVNTLAWGKSDFFYLPP
EVEFCVLANVLPLSPENKWSAMALEFMKTFCGRRVNATVQDVLVPHRTFLLDIPCLSRQM
FEMGFAKKLYSDQFKEFVSRSLQASRGTGEPQRISSIRTKPVEIIEQIEKQQAYMYPELQ
TDTVETVVITEVTSPFRIFCQLKVFSQELKKLTEQITQHYEGRVGCNFARPENLGSPCAS
RGNDGKWYRSVLQQVMSANNVVEILQVDYGKKQFVQVENVRPLAPEFFRMPVVTYVCSLH
GIADRGIGWTVSQIDYLKSLLLNRTVIAKFQYQSLSEGVHYVTLYGEENTNINKLFELKQ
KCSMVSDMTLTDFAVQKSPSSQKSKILETTKTTHIDETYSDLKGNKPVFFTESLTPNTSH
LAVVQHVESPGKFWVQTQQYADEFNQLMNGLGNLYSDPASTEGLVRKPVVGLLCAAKAQD
GVFYRAAIYKVIEKKAEVYFLDYGNTELVDCFNLRQLPLRFQQLPAVAVKCSLYGIKSKL
NHWEERATLFFSRLVEDRVIDLHVQDKHQDTHIVQLVDPSLDGENDVSKLLCNADFADSE
KSFVENSATRSGVFLTEARPQTPSGSSALTDSTSAFKEYLFPIGSSLEVTVSYIESPNDF
WCQKARNAACLEVLMQDIQRFYSHSEFQPPLEAACVARHPETGIWYRALVIQKHQTPHVD
VLFVDYGQTKKVAVEDLRKITSAFLRMKGQAFRCSLYNLIQPVSHSALDWSPEATLQFQE
FVNTAASMNVPLKCTIFAVMYDSQKVVFNVVDLETPFQSICNLLVQRRLADRAPSKKAPL
PPFRLDTYYYSTHGVKTGCEEKVSVTCVKSVTQFYCHLARNSEEIEKLSSKVNSLCHQLE
ATKCPQTFGTVCFAKYTDGLWYRGQIKSTKPSVVVNFVDYGDTLEVNKSDLLPVPIEAGE
IMSVPVQAIECGLSDMPEDVPCEVGNWFRNYADSHCFTALIVAKDPSGRLLVELYEGKTQ
VNALIRQKFHNEICRNEPSTFKGYSSKNRSAQSGATHMKESSSGLKRDFMDPVPLSRESC
VAQQGNAESKQLRGKWGFQTNGGLEPERDFGTLRNFQKQQEPQRKSNDRADVRRPCLSDK
TDAVKPKSQAALNESALPVKVIKPGLEAEVFISHCNSPCSFFVQFATDEDDIYSLVEKLN
VDQSRCANIDLSDIREGDLVCAMFPEDKSWYRAAVRKNIGDTIDVEFVDFGNTATIPASK
ICCLNQSFASLPRYSIHCSVHKLNVEDGDQELAPNFKRVIEQNIEKVMCTFVKMSGNVWE
VKLDVNGVVLGSTLSDDATSAAELTTTGVKQTSEIKVCTYYKNPDISAGQLITGYTSFIK
SPQLFWCQYAASDKLQEISDALQSAGNASKKTLSEESLPVGSACIALFTEDNLWYRAKVT
SRDLDTLSITFVDYGNEAKVSIGDVKALPPELSDVPPQAFDCQLDGFDLSEGFWAEKADD
AFFELANDKLLNITIKKMGNSEMPNLVKLDCNGAVINDAMRSFWKSQSSETPSVELLSGA
NLISDDASVATDSVVIHDSYTDHVDNETCASVLEVENSEQEQLDLLTSTKVGNEAQDDAL
EMITEDDASPDTASIVPSDAQEDLETICVIEDDSVSASPSDTNQHAFAEEADPTPVAVVL
PQHSEGATPSVTSENIDSFLMNNTDSQLRIVERPESPSSEIIQSDLGFLRRATEKKPAGS
ECVIWSRVRRNWCRARVLKSSEDAALVLLVEYDSEVVVDPLNIFEILPDKPLQASCIEAA
VPSDEVTKEKHTAVKNGHSKAEDSEYSTVVTSESEEPNGEETAIDQMDPGDEPADQLQAT
GCVSCSIILVEDSEDKDMNIVDQMWPEPVEINEPQEDLNTSAGEQRDAAQITTGVDLLMD
FLDVPLHDKTELRTDDLLEEFNNVTEDLIVLTSDGTESDTASDGTLQGDAVAKEIYTDAE
ESSCIQEKSDASDCTSAEDSRVTHLTLKVEDASDDDVIFVGVLQESEAEVYEPESENEKH
KLD
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctattccgggacttccatcaacgggttcaaatgtacctgtactcattaccaga
gtacacctgaacccagcatgtgtgctggtagagttttgggggaattttgatcaagatcga
aagtttgcttatcagcaattgaaaaaggagattcaataccccagagagggtttttgtgaa
acagatggaaaccctggtgacttgtgcctcgtccgagtgtatgaaacatggtacagagca
cgtatagtgaccagagacactgatgagtacagcgtgtttttaatcgatgaaggcagaacg
ctctgtgccactgtaaacactttagcatggggcaaaagtgactttttctatcttccccct
gaagttgaattctgcgttcttgccaatgtcctgccgctgtcccctgaaaacaaatggtca
gcaatggccttggagttcatgaagaccttctgtggtcgaagagtcaatgccactgtccaa
gatgttcttgtgcctcaccgaacattcctacttgacattccatgcctgtccagacagatg
tttgaaatgggctttgcaaagaagttgtacagtgatcagttcaaggagtttgtttccaga
tctttgcaggccagcagaggaactggagaacctcagagaatttcttccattaggaccaaa
ccagttgagatcattgagcaaatagagaagcagcaggcctacatgtacccagagctgcaa
accgatactgttgagactgttgtgatcacggaagtaacaagtccatttcgcatattctgt
cagcttaaggttttctctcaggagctgaagaagttaacagaacagataactcagcattac
gagggaagagttggatgcaattttgcaagacctgagaatttaggcagcccgtgtgcatca
agaggaaatgatggcaagtggtatcgttctgtgctgcagcaggtcatgtctgccaacaat
gtggttgagattttgcaggtggattatgggaagaaacaatttgtacaagttgagaatgtc
cgaccactcgcccctgagttcttcaggatgcctgtcgtaacgtacgtgtgctcccttcat
ggaatagccgacagaggtattggttggacagtctctcagatcgattacctgaaatctctc
ctgctcaaccgcacagtgatcgccaagtttcagtatcaaagcctttctgaaggtgtccac
tatgtcacgctttatggagaggagaacacaaacatcaacaagttgtttgaactgaaacag
aaatgttcaatggtttctgatatgacccttacagactttgctgttcagaagagcccatca
tctcagaagagcaagattctggaaacaaccaagaccacacacattgatgaaacctactcg
gaccttaaagggaacaagccagtctttttcactgaaagtctcacacctaatacttcacat
ttggctgttgtacagcacgttgagagccctggaaagttttgggttcaaactcagcaatac
gctgatgaattcaatcaactaatgaatggccttggaaatctatacagtgatccagccagc
actgaaggattggtaagaaagcctgttgttggtctcctctgtgcagctaaagcccaagat
ggtgtgttctatagagcggctatttataaggtaattgagaagaaagcagaagtttacttc
ctcgactatggcaacacagaacttgttgattgtttcaacctccgacagttgcctctgaga
tttcagcagcttccagctgtggcagtaaagtgctccctctatggcattaaatccaaactg
aaccattgggaagagagggctacgttgttcttttcgagactcgtcgaagacagagtaatt
gatttgcatgtacaagacaagcaccaagacactcacatagtccagttagtggatccgagt
ttagatggagaaaacgatgtgagcaagttattgtgcaatgcagattttgcagacagcgaa
aagagctttgtggaaaattcagcgacaagatctggagttttcttgacagaagcacggcct
caaactccttccggttcttctgccttaacggacagtacatctgctttcaaggaatacttg
tttcccattggaagttctctggaggtaactgtctcctacattgagagtccaaatgacttc
tggtgtcaaaaagccagaaatgcagcatgcttagaagtgctaatgcaagacattcagcgt
ttctattctcatagcgaattccagccacctttggaagctgcttgcgttgcccgtcatcct
gaaactgggatatggtacagagccctggtcattcaaaagcaccaaacgcctcatgttgat
gtcttgttcgtcgactacgggcagacaaagaaggttgctgttgaagatcttcgaaagatc
acttcggccttcttgaggatgaaaggacaagcctttcgatgtagtttgtacaacctgatc
caaccagtttcccactccgctttagactggagccctgaagccacattgcagtttcaagag
tttgttaacactgcagcgtccatgaatgtgcccttaaaatgcaccatatttgctgtcatg
tatgactcccagaaggttgtgttcaatgtggtagacttggagacccctttccaaagcatt
tgcaatctccttgtccaaagacgtctagctgaccgtgcaccctctaagaaagctcctctt
ccaccctttcgcctggacacatactattactccacacatggagtcaagactggttgtgaa
gagaaagtgagtgtcacctgtgtgaaaagtgtcactcagttctattgccatcttgccagg
aattcagaggagattgagaaactttcgagcaaggtcaactccctatgccatcagctagag
gcaaccaagtgtcctcagacctttggaacagtttgctttgcaaaatacacagatggactt
tggtacagaggccaaataaagtctacaaaaccatcagttgtggtcaattttgtggattac
ggtgacaccttggaagttaataaatcagacttgctgccagttccaattgaagcaggagag
atcatgtccgtcccagtgcaggcaattgaatgcgggctgtcagatatgcctgaagatgtg
ccatgtgaagtaggaaactggtttcggaattatgctgacagtcattgtttcactgctttg
atcgtggcaaaagacccaagtggaaggcttttggtggaactttatgagggaaaaactcaa
gtgaatgcactgatcagacagaagtttcacaatgaaatctgtagaaatgagccaagcaca
ttcaaaggatatagttcaaagaacagaagtgcacaaagtggggcaacccatatgaaggaa
agctccagtggtctaaaacgagatttcatggatccagttccactatcccgtgaaagttgt
gtggcacaacaaggtaatgctgaatcaaaacagctacggggaaagtggggattccaaaca
aatggtgggcttgaaccagaaagagattttgggacattgcgcaatttccagaaacagcaa
gaaccacaaaggaagtccaatgatagagctgatgtgcgtcgcccttgtctatctgacaaa
actgatgctgttaagcccaagtcccaggctgctcttaacgaatcagcgctcccagtgaaa
gtcataaaaccaggtctagaagctgaggtgttcatctctcattgcaatagcccttgtagc
ttctttgttcagtttgcaactgatgaggatgacatttattcacttgtggagaagttgaat
gttgaccaatcaaggtgcgcaaacatcgacctcagtgatattcgtgaaggagacttggtt
tgtgcaatgttccctgaagataagtcttggtaccgtgcagcagtgaggaaaaacattggc
gatacaatcgacgtcgaatttgttgacttcggaaacacggctacaattcctgcctcaaaa
atatgttgcctcaatcaatcatttgcttcgcttcctaggtacagcatccactgctctgta
cataaactgaatgttgaggatggggaccaagaacttgcacccaacttcaaacgagtaatt
gaacaaaacattgaaaaggtcatgtgcacatttgtgaaaatgtcagggaacgtttgggaa
gtgaaacttgatgttaatggtgtagtgctgggatccaccctcagcgatgatgctacatca
gcagctgagcttacgaccacaggtgtcaagcagacatctgaaatcaaggtctgcacctat
tacaagaaccctgacatatcagctggtcagctgatcactggatacacttcattcataaaa
agtccccagctcttctggtgccagtatgcagcatcggacaaacttcaagagatttcggat
gcgttacagagtgctggcaatgcatcaaaaaaaactttgagtgaggaatctctgccagtt
ggaagtgcttgcattgctcttttcactgaggataatttgtggtatcgagctaaagttaca
tctagggaccttgacacactctccattacctttgttgactatggaaatgaagcaaaagtc
agtatcggtgacgttaaagcacttccacccgagctatcggatgtgccccctcaggcattt
gactgccagcttgacggttttgatctttccgagggtttctgggctgaaaaagcagatgat
gctttctttgagctagctaatgacaagctgttaaatatcaccattaagaaaatggggaac
tctgaaatgccaaacctcgtcaagctggattgcaacggtgctgttatcaatgatgctatg
agaagcttttggaaaagtcaaagttctgaaactccatctgttgaactcctaagtggagca
aatctgatatctgacgatgcctctgtggctactgactcagtagttatacatgattcatac
actgaccatgttgacaatgaaacctgcgcatcagttctcgaggtggaaaattctgaacaa
gagcagcttgatttacttacaagtacgaaagttggaaatgaagcacaggatgacgcactc
gagatgattactgaagatgatgcctcgcctgatacagcgagtatagtgccctctgatgca
caagaggaccttgaaaccatatgtgtcattgaagatgattcagtctcagcaagtccatca
gacacaaaccagcatgcttttgctgaagaggcagacccaacacctgttgctgtagttttg
ccgcagcactctgagggagctacacctagtgttacctcagagaatatagatagcttcttg
atgaataacacagattctcaattacgcattgttgagagaccagagtcaccatcgtctgag
atcattcaatcagacttgggctttttaaggcgagcaacagagaagaagcctgctgggtca
gaatgtgtgatatggtctcgtgtaagaagaaactggtgcagagcaagagttttaaaaagc
tcagaagatgctgcattggtgttgcttgtggaatatgattctgaggtggtagtagatcct
ctcaacatctttgaaattctgccagacaagccattgcaggcttcctgcattgaagctgca
gttccaagtgatgaagtaaccaaggagaaacatactgcagtgaagaatggccattcaaag
gcggaagattcagaatattccactgttgtcacttcagagtctgaggaaccaaatggtgaa
gaaacagccattgatcaaatggatccaggtgatgaacctgcagaccagcttcaagccacg
ggatgtgtgtcttgctccataattttggttgaagattctgaggacaaagacatgaacatc
gtggatcaaatgtggcctgaaccggtagaaatcaatgagccccaagaggatttaaacacc
tcagctggagagcaaagagatgctgcccagatcactaccggtgtggatttactgatggat
ttccttgatgtgcctctccatgataagactgaacttcgaacagatgacttgcttgaggag
ttcaataacgttactgaagatcttattgttcttactagtgatggaacggagtctgacacg
gcatctgatggcacgcttcagggagatgcagtggctaaggaaatttatactgatgctgaa
gaatcttcatgcatacaagaaaagtcagatgcatctgattgcaccagcgcagaggattca
cgtgtcactcatctgaccctgaaggttgaggacgcatctgacgatgacgtcatttttgtt
ggtgttttgcaagaatccgaggcagaagtatatgagccggagagtgaaaatgaaaaacac
aaacttgactaa
DBGET
integrated database retrieval system