Garra rufa (doctor fish): 141348544
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Entry
141348544 CDS
T11039
Symbol
tdrd15
Name
(RefSeq) tudor domain-containing protein 15
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
grf Garra rufa (doctor fish)
Brite
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141348544 (tdrd15)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
141348544
NCBI-ProteinID:
XP_073708926
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All DBs
Position
13:41105461..41115185
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AA seq
1840 aa
AA seq
DB search
MERAKEESKLPAPCVLWPVELKLTHIDCSPEDTLVHFQGQYMTICELDYNILQVEIQNAV
KSKVSVQVGELCLVEDAVSGRWFRGRVQNIKKDLFQVFLLDHGDVLIVGPSHLSSISDTL
LMLPPKIVCGFFANILPVQNRWDSLTESYFSSLIGSQIKGYIHTRLPYHVLILEVPDINC
DLLKLRLGRHVDTSTFLLLVEMLIEEPIPQSNESVPDLLIEKQIEQECCLKSSSLLGFEE
ILSLNGPKLKVGQKARVVVAAAVNPQLFYCRLSSMSKDLQEMSNKLALACESGSGSLSSK
PLENLGLLCAVKGKDEKWHRGFVQCLPFNSQVRVVFVDSGYCESVKVENILQLPSEFLSI
PIMAFPCSLSCLEEQDEAIKNQQLELLKTGLLEKALEVEIYDFCKDQNVYFVTLSTAEKH
SEEQAEVQLLESEVFDSKCNFPHNVLAKTYATEMKTVQTSDTVPGEGISSGSIFEGYVVH
VRSPKHFWIRTKEQNPDFENMTEEINDYFSKLQLKDEVFEDPVPGALCCAMYEKDMHYYR
ALIVDNLEKGAEVFFIDFGNTEKVPSMLIKKLPRKFANQPEFALKCALAHVAPVEDIWTT
TASNFFRQVTSDKTLTVHVIHRKNGKYVVDLFERGAENNTSIATILTTAKMALDWRYNPA
LASIKVEMPCKENGNTQSKKKNRKADHVVTFFNVASSRPNHVFFEQQNGAETPQPKVIPD
TFKPMHFKPGSELRVICSHINSPSDFWCQNECTKVDLDKLMKEMQEFYQTHTIEFKPHSV
CCAVKSPQDNRWHRACILEDKNNKLSMMLVDFGITIQEVKENIQALAPQFSKLQEQAFRC
ALNLIEPVGGCSWSAEACDLFRDFVSEGLPTVCRIHSQLYEEGKGLLNVVTIHTPLQQAT
TCLIEKGVASEMQTPKQLISSAHPRSFVYSSFNITSGSEELVHVTQVCSPWEIYFQLDRN
TTIIETLMERVAEESQLLAMTSEDCSGNVCLAKYICDGKWYRALTHPVQSHQHVSVFFVD
YGDLQILEKTNVMPIPSTAVDLLMTPMQALRCSLLNVPEGEHLPEVNTWLETDILNKSFH
AKFVSRDNNGHFICDLYDGNVLVNEKVKELMSTQDVAVSKPARDSHRKVANVGVSNSKVN
SKASGRGKTKQVEKQTAKPTKSPKVERKGPIKAERQNMPCSLKVMPPHQSLPKLADLPAD
NMKPGSKGVGFISHCNSVRSFFIQMEDDEPNILQMGEELNSPVFKDNLKNVETEMKVGDI
IVAEFEEDSALYRAVVTNVSHCGHLAVEFIDYGNIATVDRKNVHMLTNMFLSQPRLSTPC
TLAKPYSFENDNSFIKEAVGRPLMVEFIRKLENSWEVRIEVVEDGHMHGESKYDGDQSKD
VDLTSQKASQTRNQTESYTHKAKEVKTFQQNMKPYTQQCKCELKNTQKEVRTFQQKTKTN
TQCESELGSSQTAATKQVKKTVTFLPTYIKTKEILRRRTRKRKVNSQPPCTTSISVAKNS
SVLQENVSPHAKDLETSKSPVGVALRVKDVESVESPDKSLVVDEHPRFLKNRLDRPQTFF
QAPVRMNFEYKGFAAAITTPSEFYVILEDLLLIVDTVSAILENLPEALPALPEVHFVPGA
SCLVKSVEKKKWCRAEIVQCDSTSVLMNLVDYGQYVVLSPAVGQLKKLPEELSRLPKVTY
HCLLRGVKPKGQDWSDEAIVYFQNSMCHSNLQIRFRQHVSETQWEVDIVTGKRNLAKELV
DADHATYIDNMLGIRFQQEQEPNREAKQDISSSVNVFPTMAECTSKAECSQTLFSKESVF
DQKSSQDSVGEQYTYPVNRSEDLGHVERETLSASGTKQCE
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggagagggctaaagaggagtcaaagctccctgctccttgtgttttgtggcctgtggag
ctgaagttgactcacattgactgcagtcctgaggacacactggtacactttcagggccaa
tatatgaccatctgtgaactggactacaacatccttcaagttgaaattcaaaatgcagtg
aaatcgaaagtttctgttcaagtcggagagctttgtctggtagaagatgccgtgtctggc
cgctggttcagaggacgggtccaaaacatcaagaaggatttgttccaagtctttttgctc
gaccatggagatgtgttgattgttgggcccagccatttatcctctatatctgacacactg
cttatgctcccaccaaagattgtctgcggattctttgccaatatactgccagtccaaaac
agatgggacagtctgacagagagttatttctcttccctgataggcagtcagattaaagga
tatatccacacccgtctgccgtaccacgtcctcatacttgaggttccagacattaattgt
gacctgttaaaattgaggcttgggagacatgtagacacaagtacatttttgctactagtt
gagatgcttattgaggaaccaattccacaaagcaatgaatctgtcccagatctcttgatt
gaaaagcaaatagagcaagaatgttgcttgaaatcctcaagcctgctaggctttgaagag
attctctcacttaatggcccaaagctgaaagttggtcaaaaagcaagagtcgttgtagcc
gcagctgtgaaccctcaattattctactgtcgactgtcatccatgagcaaggacctacaa
gaaatgtcaaacaaattggcacttgcatgtgaatcagggagtggatccctaagcagtaaa
cctcttgaaaatcttggcttgctatgtgcagtcaaagggaaggatgaaaaatggcacaga
ggatttgtgcaatgcctccctttcaactctcaggtccgagttgtgtttgtcgacagtggc
tattgtgaatcggtgaaggttgaaaacatccttcagctaccatcagaattcctctcaata
ccaatcatggcattcccatgttcactttcatgcttggaagaacaagatgaggccattaaa
aaccaacaactagagcttctcaagaccggattgctggagaaggctttggaggttgaaatc
tatgacttttgcaaagatcagaatgtctattttgtcacactgagcactgctgagaagcac
tcagaagagcaagctgaagtccaactgcttgaaagtgaagttttcgacagcaagtgtaac
tttccccacaatgtccttgcaaagacatatgcaacagaaatgaaaacagtccagacttct
gatacagttcctggcgaaggaatatctagcggttcaatttttgagggttatgtggtgcat
gtccggagtccaaaacatttctggataaggacaaaagaacaaaatcctgattttgaaaac
atgactgaagaaatcaatgattacttcagcaaactacagttgaaggatgaggtttttgaa
gacccagtgcctggtgcactttgctgtgcaatgtacgaaaaagacatgcattactacagg
gcgcttatagtagacaatttggaaaaaggagctgaggtgtttttcattgacttcgggaat
actgaaaaggtgccaagcatgttaattaagaagctccccagaaagtttgccaatcagcca
gaatttgctctgaaatgtgctttagcacacgttgctccagttgaggacatctggacaaca
acagcatccaacttctttcggcaagtcacttcagacaaaacattaacggttcatgtcata
cacaggaaaaatggcaaatatgttgttgatctttttgagagaggagctgaaaataacact
agcatcgcaaccatcttgacaacagcaaaaatggccctggattggagatacaacccggca
ttagcatctattaaagtggagatgccatgtaaagaaaatggaaatactcagagcaagaaa
aaaaatagaaaggctgatcatgtggtgacctttttcaacgtcgcatcttcaaggcccaat
catgtgttctttgaacaacagaatggcgctgagacacctcaaccgaaggtcattcctgac
actttcaaaccaatgcatttcaaaccaggatctgaattacgtgtcatttgctcacatata
aattctccgtctgatttctggtgccaaaatgaatgcacaaaagttgatctggacaagttg
atgaaagagatgcaggaattttaccaaacgcacacaattgaattcaagccgcattcagta
tgttgtgctgtcaagtctccgcaggacaaccgatggcatagagcatgcattttagaagac
aaaaacaacaaactgtctatgatgttggttgactttggcataactatccaggaagtaaag
gaaaacatccaagctcttgcgccacagttctctaaacttcaagaacaagcattcagatgc
gctttgaacctgattgaacctgttggaggatgttcttggagtgcagaagcatgcgatttg
ttcagagattttgtgtctgagggtttgcccactgtgtgcagaattcattcccaactttat
gaggaaggaaaaggtctcctcaatgtggtcaccatccatacacctcttcaacaggccacc
acttgccttatagagaaaggcgttgcaagtgaaatgcaaactccaaagcagctaatctca
tcagcccatcctcgctcctttgtttactcttctttcaacataacttctggaagcgaagag
ctggtgcatgttactcaagtttgcagtccttgggaaatctatttccagcttgacaggaat
acaacgatcattgaaacactaatggaaagagttgcagaagaaagtcagctcttggctatg
acatctgaggactgcagtggtaatgtttgcctggccaaatatatctgtgacggcaagtgg
tacagggctctaacacaccctgttcaatcccatcagcatgtgagtgtgttcttcgtcgat
tatggtgatctgcagattttggagaaaacaaatgtaatgcctattccttcaacggcagtt
gacttattaatgaccccaatgcaggctctgagatgcagtcttttgaatgttccagagggg
gagcatttgccagaagtcaacacatggctcgagactgacattctcaacaaatccttccat
gccaagtttgtgtcaagggacaacaatggacattttatttgtgatctttatgatggaaat
gtgcttgtcaatgaaaaagtcaaagagctcatgtcaactcaggatgtggctgtcagcaaa
cctgcccgagattcccaccgtaaagtagcgaatgttggcgtttcaaacagtaaagtgaac
tccaaagcaagcggacgtggtaaaaccaaacaggttgaaaagcaaactgcgaaacccaca
aaatctccaaaagtagaacgcaaaggaccaataaaagctgaaaggcagaacatgccctgt
tctcttaaagtgatgccgcctcatcagagcttgccaaaacttgctgatcttcccgctgac
aatatgaaaccaggttctaaaggtgttggcttcatctctcattgcaattctgttcgaagc
ttcttcatccagatggaagacgatgaaccaaacatccttcagatgggtgaggaactaaac
agccctgtcttcaaggataacttgaaaaatgtggaaactgaaatgaaagtaggggacatc
attgtggctgagtttgaagaagactctgctttgtacagagctgttgtcaccaacgtatca
cactgtggccacttagcagtggagtttatcgattacggcaatattgcaactgtcgacagg
aagaacgttcacatgctaaccaatatgtttttgtctcaacccagactgagcacaccgtgc
acgcttgcgaaaccttactcttttgaaaacgacaactcttttatcaaggaagcagtcggt
aggcctttaatggttgagttcattcgaaaacttgaaaattcatgggaagtgaggattgaa
gttgttgaggatggccacatgcatggggaatcgaagtacgatggtgatcagagcaaagat
gtagatttgacgagtcaaaaagcatcccagaccagaaaccaaacagagtcttatacccac
aaggctaaagaggttaaaaccttccagcagaacatgaagccatacacacaacaatgcaaa
tgtgaactcaagaacactcagaaagaagttaggaccttccagcaaaagactaagacaaat
acacaatgcgaaagcgaacttggaagcagtcagacagctgcaacaaaacaagtgaagaaa
acagtgactttcttaccgacgtacatcaaaaccaaagagattttgagaaggagaacaaga
aagagaaaggttaactcccaaccaccatgtacaacaagcatttcagtggctaaaaattca
agtgtgttgcaggaaaatgtttctcctcatgctaaagaccttgaaacctcaaagtcacct
gttggcgttgctcttcgagtgaaagatgtcgagtcagtggagagtcctgacaagtcgctt
gttgtcgatgagcatcctcgcttcctgaagaaccgtttggatcgaccacagactttcttc
caggcccctgtccgaatgaactttgaatataaaggattcgcagcagcaatcacaacccca
tctgaattttatgtcattctcgaagacctgcttttgattgtagatacagtctctgctatt
cttgagaaccttcccgaagcgttgccggcattaccagaggttcatttcgttcctggtgca
agctgcttggttaaatcggtggaaaaaaagaaatggtgcagggctgagatcgtccagtgt
gattccacatcggtgctcatgaacttggttgactacgggcagtatgtagttctgtctcca
gctgtcggccagctgaaaaaacttccagaggagctcagtagattacctaaagtcacctat
cattgtctactaagaggagttaaacccaaaggccaggactggtctgatgaggccatcgtt
tacttccagaactctatgtgtcacagcaaccttcagatacgtttccgacagcatgtttct
gagacacaatgggaggtcgacattgtcactggaaagcgaaatctcgcaaaagagctagta
gatgctgatcatgccacatatattgataatatgcttggaatcaggtttcagcaagagcaa
gaacccaatagagaagccaaacaagacatctccagcagtgtgaatgtttttcccacaatg
gctgagtgcacaagcaaagccgaatgttctcagacactcttttcaaaggagtccgtgttt
gatcaaaagtcgtctcaagattcggttggggagcagtacacataccctgtgaacaggagt
gaagatcttggacatgtagagagggaaacgcttagtgcatcaggtaccaaacaatgtgag
tga
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