Garra rufa (doctor fish): 141348653
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Entry
141348653 CDS
T11039
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141348653 (papola)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141348653 (papola)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
141348653 (papola)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
141348653 (papola)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
141348653
NCBI-ProteinID:
XP_073709024
LinkDB
All DBs
Position
13:complement(16484542..16504798)
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AA seq
735 aa
AA seq
DB search
MPFPITSQVQTVQQTPKHYGITSPISLALPKEADLVFTRKLTETLRPFGVFEEELELQRR
ILVLGKLNTLVKEWIRDVSETKNIPASVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLSFDGIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQSKADWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKEGADKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEPDM
KITAMHVKRKQLQQLLPKMAIQRSKRKHSSDGLRAMNDGSLDLSLDSDNSMSVPSPTGPS
KAARASSPQGSTGAATNTSDLQGKMDSSRGSTLVAGVDATKPDNVGTSSSNAQRKCAAPL
KLPTSPVQHDSEKKAKVDSVQQDPHPSPSASPVSKRPASPFENETSKKAKVEELSTPEAS
SGETDGHVAVDPALSIEVVPSEGESKTETELTAVETAEKTPLTQKTSNADLSDVPSLPAN
PIPVVKNSIKLRLSR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccgattactagtcaggtgcaaactgtgcagcagaccccaaagcattatggg
atcacgtctcctatcagcttggcactacctaaagaggctgatctggttttcactcggaag
ctgacagagacacttcgaccctttggcgtctttgaggaggaattggagctgcagcgcaga
atcctagtgcttgggaagctaaatacattggttaaggagtggatccgtgatgtcagtgaa
accaagaatattccagcatcagtgattgataatgttggtggaaaaatcttcacgtttggt
tcctacagacttggagttcataccaagggtgctgatattgacgctctctgcgttgcaccc
cgtcacgtggagagaactgacttcttctcttcgttttatgagaaattaaaggagcaggag
gaagtcaaagacctgagggcggtggaggaagcatttgtacccgtgataaagctgtccttt
gatggcatagagattgatatactatttgcccgactggcactacaaaccattccggagaac
ctggatttgcgagatgatggcctactgaagaaccttgacattcgctgcatccggagtttg
aacggttgcagagttactgatgaaattctccacttggtacccaacatagagaatttcaga
ctgactctaagagcgatcaagctgtgggccaaacgtcataatatatactcaaatatcctg
ggttttctggggggtgtatcgtgggccatgttggttgcgagaacctgccaactctacccc
aatgctgtggcatccacactggtccataagttctttttggttttctcaaagtgggaatgg
ccaaaccctgtccttctaaagcaacctgaagactgtaatctcaacctcccagtctgggat
cccagggtaacccccagtgaccggtatcacctcatgccaatcatcacaccagcttaccct
caacaaaactccacttacaatgtgtctgcctctactcgggccatcatggtggaagagttc
aagcggggtcttgcaatcacggatgaaatattgcagagtaaagcagattggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagtgca
cagacagagaagcagcacttagagtgggtggggctcgtggaatcaaagatccgaatcctg
gtgggaaacctggagaaaaatgagttcatcacactcgctcatgtgaatccacagtcattc
ccgggaccaaaagagggagctgacaaggaggagttcagcacaatgtgggtaataggtatt
gtgttcaaaaaaatggagggatcagaaaatcttaacgtggacctgacgtttgacatccag
tctttcacggacacagtttaccggcaggcgatcactagtaaaatgtttgagccagatatg
aaaatcacagccatgcacgtgaagaggaaacaactgcaacaactactgcccaaaatggct
attcagaggagcaagaggaagcattcatctgatggccttcgtgcgatgaatgacggcagt
ctcgacctatcacttgacagtgataacagcatgtcagtgccgtcccccacgggcccttcc
aaggctgcccgtgcctccagccctcagggctccactggtgctgccacaaacacctcagat
ttgcagggaaaaatggactcttcaagaggaagcacgctcgtggcaggtgtggatgccact
aagccagataatgttgggacttccagcagcaatgcccagcgaaagtgtgcagctccatta
aagctgcccacctcacccgttcagcatgactcagagaagaaagccaaagtggacagtgta
caacaggaccctcatcccagtccatctgctagcccggtcagtaaaagacctgcttcaccg
tttgagaatgagacatccaagaaagccaaagtagaggagctctcaaccccagaagcgtcc
tcaggtgaaactgatggccatgtagctgtggatccagcgcttagcattgaagttgttcct
tcagagggtgaatctaaaacagagacagaattaacggcggtggaaacagcagaaaagaca
ccgcttacccagaaaacttctaacgctgatctgtcggatgttccgagcctcccagccaac
cccatccccgtggtcaagaactccatcaagctgagactcagcaggtag
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