Garra rufa (doctor fish): 141348860
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Entry
141348860 CDS
T11039
Symbol
psmc1b
Name
(RefSeq) proteasome 26S subunit, ATPase 1b
KO
K03062
26S proteasome regulatory subunit T2
Organism
grf Garra rufa (doctor fish)
Pathway
grf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
141348860 (psmc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
grf03051
]
141348860 (psmc1b)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
141348860 (psmc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_28
AAA_3
AAA_25
ATPase
AAA_14
RNA_helicase
NPHP3_N
TIP49
NB-ARC
AAA_33
Prot_ATP_ID_OB_N
IstB_IS21
NACHT
Mg_chelatase
ABC_tran
Parvo_NS1
AAA_7
AAA_24
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
141348860
NCBI-ProteinID:
XP_073709268
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All DBs
Position
13:complement(12489541..12499037)
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKRKAKGPDAASKLPLVTPHTQCRL
KLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVAEDVNLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagtcaaagcggagggcacggaccgggaggtggaaagaaagatgataaggac
aagaagaagaaatatgagccgcccattccaactagagtgggcaagaagaagaggaaggcc
aagggccctgatgctgccagcaaactgcctttagtcacccctcacacacagtgcaggctg
aaactcctgaagcaggatagaattaaagattacctgctgatggaagaggagttcatccga
aaccaggagcagatgaaacctctagaggagaaacaggaggaggagaggtcaaaggttgat
gacctgagggggactcctatgtctgtgggaaccctagaggagatcattgatgacaatcat
gccatcgtctccacatctgtgggctctgagcactacgtcagcattctgtcatttgtcgac
aaagatctgctggagcccggttgttctgtcttactcaatcacaaggtccatgctgtcata
ggggttctgatggatgacacagaccctcttgttaccgtcatgaaggtggagaaggctcca
caggagacatacgctgacatcggtggcctggacaatcagatacaagaaattaaggagtct
gtggagcttccgctgacccatccggagtattatgaggaaatgggaattaagcctcccaaa
ggggtcattctctacggtgcccctggaacaggtaaaaccctccttgccaaggcggtggcc
aatcagacgtctgcaacatttttgcgggttgttggttcagagctgattcagaagtatctc
ggcgacggccctaaactagtacgtgagctcttcagggtggcagaggaacatgctccttct
atcgtcttcattgatgagattgatgccattggaactaaaagatatgactcaaactcagga
ggtgaacgtgaaattcagagaaccatgttggagctcctcaaccagctggatggctttgat
tcacgtggagatgtgaaggtcattatggctaccaacagaatagagacccttgaccctgct
cttattagaccgggtcgcattgaccgtaagattgagttcccgttgccagatgagaaaacc
aagagaaggatcttccagatccacaccagcagaatgaccgtggctgaggatgtaaacttg
gacgacctcatcctggctaaagacgacctttcaggagctgatattaaggccatctgtacg
gaagcaggtctcatggccctcagagaacgcaggatgaaggtcaccaacgaggacttcaag
aagtcgaaagaaaacgttttgtataagaagcaggagggcacccctgaaggcctctatctc
taa
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