Garra rufa (doctor fish): 141348887
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Entry
141348887 CDS
T11039
Symbol
psma6b
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
141348887 (psma6b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141348887 (psma6b)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
grf03051
]
141348887 (psma6b)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
141348887 (psma6b)
Peptidases and inhibitors [BR:
grf01002
]
Threonine peptidases
Family T1: proteasome family
141348887 (psma6b)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
141348887 (psma6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
141348887
NCBI-ProteinID:
XP_073709299
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All DBs
Position
13:complement(12361283..12368965)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL
LDSSTVTHLFRITENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMIVIGVDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLE
KKVKKKLDWTFAQTVETAITCLSTVLSIDFKPSELEVGVITAEDPKFRILSESEVDTHLV
CLAEKD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggttctagcgcgggatttgaccgtcacatcaccatcttttctccggagggg
agactttatcaagtagaatatgcattcaaggccataaaccagggtggtctgacatcagtt
gctgttcgggggaaagactgcgcggtagtcgtcacacagaaaaaagtcccagacaagctg
cttgattcttccactgtcacacacttattcagaatcacagagaacattggctgcgtcatg
tcaggaatgacagctgacagcaggtctcaagtgcagcgagctcgctacgaagccgccaac
tggaagtacaagtatggttatgagattccagtagacatgctttgtaaaaggatcgctgac
atctctcaggtttatacacagaatgcagagatgaggccgctcggctgctgcatgattgta
attggtgtagatgaggaactcgggccacaggtttataagtgtgacccagcaggttattac
tgtggcttcaaggccacggctgccggcgtgaagcagacagaggctacaagctttctggag
aaaaaagtgaagaagaaactcgattggaccttcgcgcagacagttgagacggcgatcact
tgtttatcaactgtgctgtcaatcgatttcaagccatctgagttggaggtaggcgtcatc
acagcagaggatccgaaattcaggattctgtcagagtcagaggtggacactcatttggtt
tgtctggctgagaaggactga
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