Garra rufa (doctor fish): 141348893
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Entry
141348893 CDS
T11039
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
grf Garra rufa (doctor fish)
Pathway
grf03082
ATP-dependent chromatin remodeling
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141348893 (yy1b)
03083 Polycomb repressive complex
141348893 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141348893 (yy1b)
03036 Chromosome and associated proteins [BR:
grf03036
]
141348893 (yy1b)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141348893 (yy1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141348893 (yy1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
141348893 (yy1b)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
141348893 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
MAM
zf-C2H2_ZN142
IBR
Motif
Other DBs
NCBI-GeneID:
141348893
NCBI-ProteinID:
XP_073709304
LinkDB
All DBs
Position
13:39153155..39161733
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AA seq
394 aa
AA seq
DB search
MATGETLYIEADGTEMPGEIVELHEIEVETIPVETIETTVVGGDDDDEDDEEHQPMIALQ
PLVTDDPSQVHHHQEVILVQTREEVVGGDDSDLRGDDGFEDQILIPVPAPGAEEEYIGQT
LVTVAGKSSVGRLSKKAASGGKKAGKKSYLSAAEASGRKWEQKQVQIKTLEGEFSVTMWA
SDDKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARSETL
LNQNINPFSNSGAHFARSPVRMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTH
GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD
RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggcgaaacgctgtacatcgaggcggacggcacggagatgcccggggagatc
gtggagctgcacgagatcgaggtggaaacgattcctgtggaaaccatcgagaccacggta
gtcggcggagacgacgacgatgaagacgacgaggagcatcagcccatgatcgcgctgcag
ccgctggtgacggacgacccgagccaggtccaccaccaccaggaggtgattctggtccag
acccgggaggaggtggtcggcggcgacgattcggacctgcggggggacgacggcttcgag
gaccagatcctcatcccggtgcccgcgcccggcgcggaggaggaatacatcggccagact
ctggtgacagtcgcgggcaagagctccgtggggcggctgagcaagaaagcggcgtcaggt
ggcaagaaagcgggcaagaagagctacctgagcgcggccgaagccagcgggaggaaatgg
gagcagaagcaggtgcagatcaagaccctggagggcgagttctccgtcacgatgtgggct
tcggatgacaagaaggacatcgatcatgagacggtggtggaggagcagattattggggag
aactctcctccggattattccgaatacatgacaggaaagaagctcccgcccggcggaatc
ccgggaatcgacctgtcagaccccaaacagctggcggagttcgccaggtcagagacactg
ctcaatcaaaacatcaaccccttcagtaacagcggagctcattttgctcgtagtcccgtt
cgaatgaagccgaggaagatcaaggaggacgacgcgcctcggacgattgcctgcccgcac
aaaggctgcactaaaatgttcagggataattcagccatgaggaagcacctccacactcac
ggcccgcgggttcacgtgtgcgcagagtgcgggaaagccttcgtggagagctccaaacta
aagcgccatcagctggttcacaccggagagaagcccttccagtgtacgtttgagggctgt
gggaagcgtttctctctggactttaacctccggacgcacgtccggattcacaccggggac
cggccctacgtttgcccgtttgacggctgcaataaaaagttcgctcagtccaccaacctc
aaatcacacatcctgacacacgccaaagccaaaaacaaccaatga
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