Christiangramia salexigens: LPB144_02680
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Entry
LPB144_02680 CDS
T04586
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
grl
Christiangramia salexigens
Pathway
grl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB144_02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grl03019
]
LPB144_02680
Messenger RNA biogenesis [BR:
grl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LPB144_02680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
UPF0154
Motif
Other DBs
NCBI-ProteinID:
APG59378
UniProt:
A0A1L3J2N5
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All DBs
Position
607494..609056
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AA seq
520 aa
AA seq
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MEILIIVIAAVVGLAIGFAIAKMLEKKQASQTVANARNEASGIIKEAKAEGESIKKDKIL
QAKEKFIELKSEHEKVILARDKKISEAEKRIKDKESHVSNELGKNKKLNKDLEEKIADYD
HRLDYLEKKQEEVDKLHNSKVQQLEVISGLSAEDAKAQLIESLKDSAKADAMSLIQDTVE
EAKLTAQQEAKKIIINTIQRIGTEEAIDNCVSVFNLESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTRKQIEEEII
DIGKRTVIDLGIHGLQPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPKL
AKRAGLLHDIGKVPETETEVPHAILGMQWAEKHGEKPEVCNAIGAHHDEIEMNSLLSPIV
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVKKAYAIQAGRELRVIVESEKVT
DDKAANLSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaatactaataatagttatagcagcagtggtaggccttgcaataggttttgcgatt
gcgaaaatgctcgaaaagaaacaggcttcccaaacggttgcgaatgccaggaatgaggcg
tcgggaatcatcaaggaagctaaggcagaaggcgagagcattaaaaaggataaaattctt
caggcgaaagagaaattcattgaattaaagtctgaacatgagaaagtgatccttgccaga
gataagaagatcagtgaagctgaaaaaagaattaaggataaagaatctcatgtttccaac
gaattaggaaagaacaaaaaactgaataaggatctggaagagaagatcgcagattacgat
cacaggctggattacttagagaaaaaacaggaggaagtagataagcttcataatagtaag
gttcaacagctggaagtgatttcaggactttctgcagaagatgccaaagcgcagcttatt
gagtccttaaaagattcggctaaggcagatgccatgtctttaatacaggatactgtagaa
gaggctaagcttactgcacagcaggaagccaagaagatcatcatcaatactattcagaga
attggaaccgaagaagctattgataactgtgtgtcggttttcaacctggaaagcgatgat
gttaaaggtagaattattggacgtgagggacgtaatattcgtgctctggaagcagctaca
ggggtagagatcatagtagatgatactccggaagcaattatacttagttgttttgattcg
gttagaagagaggtagcaagattgtcgcttcataagctggtaacagacggccgaattcac
ccggcgagaattgaagaagtggttaagaaaacccgtaagcagattgaagaagaaatcatt
gatataggtaagagaactgtgatagatcttggtatccacggtcttcagcctgaattaata
aaaatggtaggaagaatgaagtatcgttcttcttacggtcaaaacctgcttcaacactca
cgtgaagtagctaagctatgtggtgtaatggctgcagaacttggtcttaatcctaaactt
gcaaaacgtgcaggattacttcatgacatcggtaaagtgccggagactgaaacagaagta
cctcacgcgatacttggaatgcagtgggcagagaagcatggagagaaacctgaggtgtgt
aacgctattggtgctcaccatgatgagatagaaatgaattcactattatctcctatagtt
caggtttgtgatgcgattagtggtgcaagaccgggagcaagaagacaggttctggattca
tatattcagagacttaaagaccttgaggatattgcatttggatttggaggagttaagaag
gcttatgctatccaggccggtagagagcttagggtgattgtggaaagtgaaaaagtaacc
gatgataaggctgctaatctttcttttgagatctcccaaaagatccagacagatatgacc
tacccaggtcaggttaaagtaaccgtgatacgagagacaagagcagtaaatgtcgcaaag
tag
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