Christiangramia salexigens: LPB144_02820
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Entry
LPB144_02820 CDS
T04586
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
grl
Christiangramia salexigens
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grl03016
]
LPB144_02820
Enzymes [BR:
grl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LPB144_02820
Transfer RNA biogenesis [BR:
grl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LPB144_02820
Prokaryotic type
LPB144_02820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
DUF6144
Motif
Other DBs
NCBI-ProteinID:
APG59404
UniProt:
A0A1L3J2Q4
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All DBs
Position
638447..639355
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AA seq
302 aa
AA seq
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MKVNILGCYAATPRSFTNPSSQVLEIKNHLFLIDCGEGTQVQLRKNKIKFSKIEHIFISH
LHGDHFYGLVGLVSTFRLLNREKELHIYGPKGIKEIITLQLKLSKSWTNYPLIFHELTSK
EPQVIFEDLKVSVSTIPLKHRIYTNGFLFKEKTGDRKLLINEALKYNIDVTLYKSLKKGK
DVISEDGELIPNALVTAPPDDPLSYAYCSDTVYDPEIVPLIKEATALYHESTFLEQQAEL
AFPTKHSTARQAATIARDAQVMLLILGHYSTRYPDIQLFKTEAESIFQNIILADDGKEIS
VK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaatattcttggttgttacgcggctactccacggagtttcacaaatcccagt
tctcaggttctagaaataaagaaccatcttttccttatagattgtggagagggaacacag
gtgcaactgcgcaagaataagatcaaattttccaagattgagcacatttttatttctcat
ttacacggagatcatttttatggtctcgtgggcttagtttctacttttagattattaaat
agagaaaaggaattacacatttatggacccaagggaataaaagagataataacgctgcag
ctaaaattatctaaatcctggaccaattatccacttatttttcacgaattaacttccaaa
gaacctcaggtcatttttgaagatttgaaagtaagcgtttctaccataccattaaaacat
cgcatctataccaacggtttcttattcaaagagaaaaccggagatagaaaacttttgata
aatgaagctcttaagtataatatagatgtaacgctttataagagcttaaaaaagggcaaa
gatgtcatctcagaggatggagagttaattccaaatgcattagtgacagcaccaccagat
gatccactttcctacgcttattgcagtgatacggtctatgatcccgaaatcgttccactt
attaaggaggctactgcactctatcatgaatctacttttttggaacaacaggcagaatta
gcttttcctacaaaacattccacggctcgccaggctgcaactatagccagggatgcacaa
gtaatgcttcttatactgggtcattattctacgcgttatccagacattcaactattcaaa
accgaggcagaatcgatttttcaaaatatcattttagccgatgacggaaaagaaatatcc
gtcaagtaa
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