Christiangramia salexigens: LPB144_06130
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Entry
LPB144_06130 CDS
T04586
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
grl
Christiangramia salexigens
Pathway
grl03420
Nucleotide excision repair
grl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB144_06130
03430 Mismatch repair
LPB144_06130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grl03400
]
LPB144_06130
Enzymes [BR:
grl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB144_06130
DNA repair and recombination proteins [BR:
grl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB144_06130
MMR (mismatch excision repair)
Other MMR factors
LPB144_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
APG60019
UniProt:
A0A1L3J4F0
LinkDB
All DBs
Position
complement(1352268..1354589)
Genome browser
AA seq
773 aa
AA seq
DB search
MEAYLAELNDAQRAPVLQKEGPMIVIAGAGSGKTRVLTYRIAYLMDQGVDPFNILSLTFT
NKAAREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEGDKLGYPSNFTIYDSQDSQSV
IRAIIKDFRLDKDVYKYKQVHNRISSYKNSLITVKAYFQNPELQEADAMSKKPRLGEIYK
EYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLQKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDDVQMYRLEQNYRSTRNIVNAANS
IIDKNQTKLDKIVWTANDDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQMNNGDFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEALKRVINYP
SRGIGQTTMDRLAVAANQHKRSIFEVIENLDKLDLKINRGTQTKLENFVNMIRSFAIMNE
TSDAFQVAETVTRKTGLVQELKKDGTPEGIARIENIEELLNGIRDFVEGQKELADATGSL
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPFVYIVGLEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMVPQDDYK
YKPMIDTDIFGDEVDKSKLRQTKPKKGTPPPAHKPSEEQLRKLRKLKPAAQEPEKARNTI
ELIEGNEVEHMRFGKGKVLKIEGIGQDKKAEIDFEEGGIKNLLLRFAKLKVLS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcttatttagctgaattaaatgatgcacaaagggcgccggtgctgcaaaaagaa
ggccccatgatcgttattgccggtgcgggttccgggaagacaagggtgcttacttatagg
atcgcttacctgatggatcagggagtggatccatttaacattttgtcccttacgtttacc
aataaagcggcccgtgaaatgaagcagcgtatctctaagatagttgggagcagcgaggcg
aagaatttatggatgggaacctttcactcggtctttgcaaagatcctgaggttcgaaggg
gataaactcggttatccatccaatttcactatttatgacagtcaggattcacagagcgtt
ataagggccataattaaagattttaggctggataaggatgtttataagtataagcaggtt
cataaccgcatctcttcttacaagaacagtctgattaccgtaaaggcttattttcagaat
ccagaattgcaggaggctgatgccatgtctaaaaaaccaaggttaggtgagatctataag
gaatatgtagatcgttgctttaaagcaggagccatggactttgatgatcttcttttaaag
acaaacgagcttttgaatcgctttcctgaagtacttcagaaataccagaacaggtttaaa
tatattctggtggatgagtatcaggatacgaaccactctcagtatttgatcgtaagggct
ttgtctgataaatttcagaatatatgtgttgtaggggatgatgcgcagagtatatatgcg
tttagaggtgcgaatattaataacattctgaatttccagaaggattatgatgatgttcag
atgtacagactagaacaaaattaccgctctaccagaaatatcgtaaacgccgcaaactct
attatagataagaaccagaccaaacttgataagattgtttggactgcaaacgacgatggt
ccaaagatcattgtgaacaggctgcttaccgatggtgaagaggggagatatgtagcaagc
tccatctttgagaataagatgcagaaccagatgaataatggcgattttgccattttatac
cgtaccaatgctcagagtagggcaatggaagatgctttaagaaaaaaggatatcccttac
agaatatacggtgggctctctttctaccaacgtaaagagatcaaggatgttcttgcctat
ttaagactgatccttaacccaaaggatgaagaagctttaaagcgtgttatcaattatcct
tcccgcggaattgggcagaccacaatggacaggcttgctgtggcagcaaatcagcataaa
cgctctatttttgaggtaatagagaatttagataagctggaccttaagatcaatagaggg
actcagacaaaattggaaaacttcgtgaacatgatcaggagttttgccataatgaatgag
accagtgatgcatttcaggttgctgaaaccgtaacaagaaagaccgggttggttcaggaa
ttgaaaaaagatggtacaccagaaggaattgcgcgaattgaaaatatagaggaactttta
aatggtatcagagacttcgtggaagggcagaaggaacttgcagatgccacgggatcgctc
tcagagtttctggaagatgtggctttggctacagatctggacaaagataccggagatgat
gaccgtgttgccctgatgacgatccacctggcaaaaggtcttgaatttcctttcgtttat
atcgttggactcgaagaggatcttttcccttcagccatgagtatgaataccagaagtgaa
ctggaggaagaaagaagactgttttatgtagctcttacccgagcagagaaacaagcctat
ttaacgtatactttatcacgctatcgctggggaaaacttgtagatgcagagccaagtagg
tttatcgaagaaatagacgatcaatacctggatctcatggtgccgcaagatgattataaa
tacaagccaatgatagatacagatatctttggtgatgaggtggataaaagtaaactaagg
caaaccaaacctaaaaaaggcactcctccgccagcacataaaccttcagaagagcaattg
agaaagctacggaagctaaagccggcagcacaggaacctgagaaggccagaaataccata
gagcttattgagggtaatgaggtagagcatatgcgttttggaaaaggtaaggtcctgaag
atcgaaggcataggtcaggataaaaaagcggagatcgattttgaggaaggtggaatcaaa
aatcttctactgcgctttgcgaaactgaaagtgctttcctaa
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