Christiangramia salexigens: LPB144_07380
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Entry
LPB144_07380 CDS
T04586
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
grl
Christiangramia salexigens
Pathway
grl03030
DNA replication
grl03430
Mismatch repair
grl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB144_07380
03430 Mismatch repair
LPB144_07380
03440 Homologous recombination
LPB144_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grl03032
]
LPB144_07380
03400 DNA repair and recombination proteins [BR:
grl03400
]
LPB144_07380
Enzymes [BR:
grl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB144_07380
DNA replication proteins [BR:
grl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB144_07380
DNA repair and recombination proteins [BR:
grl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB144_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
APG60241
UniProt:
A0A1L3J546
LinkDB
All DBs
Position
1642506..1643936
Genome browser
AA seq
476 aa
AA seq
DB search
MKDVKFAITDIETTGSGIKGNKITEICVIVVQNGEVIDEYSSLVNPSQSIPLYIESLTGI
NDEMVSSAPAFSEIANEVEEITKDCIFVAHNVNFDYNIIRAEFASLERNFKRKRLCTVRL
TKKLIPGLFSYSLGNICSSINIPHLDRHRAKGDCEATVTLFQRCLSLDPEFDVIKTLLNQ
KTAASYLPPNFKSSDFEKLPVSTGVYFFKDKDGRPIYIGKAKNIKSRIKSHFQERSNRKY
KMMQETYSIDYELTGNELLALLRESELILKYYPKFNKAQKKVSRPYTLTSYHNQKGIERF
ALHKNKIAPVSWMKFYTREDAIKFLEYLCIEFQLCPKYCGLQTGVDVCDHYKITNCSGVC
DDEISIDEYNERVSNAIDHISTYEDSCLLLEQGRHKNEKSFIYLKKGRYSGYGYIESSEE
LNHPGEFKNFLIPQKTSSYADRILNRYLNTKKNIVKIPLATKEKEFAKTEEEIWFG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtaaagttcgcgatcacagatattgagaccacaggcagtggaattaaaggc
aacaagatcacagagatctgcgtgatcgtcgtccagaacggggaagtgatcgatgaatat
tcctccttagtgaatccaagtcagtcgatcccgctttatatcgaaagcctcaccgggatc
aatgatgagatggtgagcagtgcccctgctttttcagaaatcgccaatgaggtagaagag
attaccaaagactgcatatttgtagctcataatgtcaatttcgactataatattattcgt
gcagaatttgccagccttgaaaggaattttaagcgcaaaagattatgtacggtaaggctg
accaagaagctcattcccggacttttctcttatagccttggaaatatttgcagttccata
aacattccgcatttggatcggcacagggctaagggagattgtgaagccacggttacatta
tttcagcgttgcctctcgctggatcctgaatttgacgttattaaaaccttgctgaaccag
aaaacggctgcttcttaccttccacctaattttaaaagttcagatttcgaaaaactgcct
gtttcaacaggagtctattttttcaaggataaagatggcaggccgatctatattggaaag
gcgaaaaatatcaaaagccggataaaatctcattttcaggaaaggtccaaccggaaatat
aaaatgatgcaggaaacctacagcatagattatgaacttaccggcaatgaacttctcgca
ttattacgtgaatctgaactaatcctgaaatattaccctaaattcaacaaagcacagaaa
aaagtttccagaccttatacccttacctcctaccataatcaaaaaggaattgagcgcttt
gcgcttcataagaacaagatcgctccggttagctggatgaaattctacacacgtgaagac
gccataaaatttcttgaatacctgtgtatagaatttcaactttgtccaaaatattgcggc
ttgcaaacaggagttgatgtgtgtgaccattataagatcactaactgctccggcgtttgt
gacgacgagataagcattgatgaatataatgaacgcgtctccaatgcgatagatcatatc
tcgacctatgaagattcctgcctgcttcttgaacagggaagacataaaaatgagaagtct
tttatttatctaaaaaaaggtcgctattcaggttatggctatatagagagttcggaagag
cttaatcatcccggtgaatttaaaaattttctgatccctcaaaaaacctcaagttatgcc
gacaggatcctaaaccgatacctgaatacgaaaaagaatattgtaaaaataccactagcg
actaaagagaaagaatttgcgaaaactgaagaggagatctggtttggataa
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