Christiangramia salexigens: LPB144_08525
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Entry
LPB144_08525 CDS
T04586
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
grl
Christiangramia salexigens
Pathway
grl03030
DNA replication
grl03410
Base excision repair
grl03420
Nucleotide excision repair
grl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB144_08525
03410 Base excision repair
LPB144_08525
03420 Nucleotide excision repair
LPB144_08525
03440 Homologous recombination
LPB144_08525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grl03032
]
LPB144_08525
03400 DNA repair and recombination proteins [BR:
grl03400
]
LPB144_08525
Enzymes [BR:
grl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB144_08525
DNA replication proteins [BR:
grl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPB144_08525
DNA repair and recombination proteins [BR:
grl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPB144_08525
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB144_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH
HHH_5
NYN_YacP
IMS_HHH
RNA_pol_Rpb4
Motif
Other DBs
NCBI-ProteinID:
APG60445
UniProt:
A0A1L3J5N1
LinkDB
All DBs
Position
1907778..1910603
Genome browser
AA seq
941 aa
AA seq
DB search
MADQKRLFLLDAYALIFRGYYAFIKNPRINSKGFNTSAIMGFTNSLFDVIRREKPDHLAV
CFDKNGSEARTEMFTEYKANRDETPEPIREAIPIIQDILRAMHIPVVELSGMEADDIIGT
LAKQAEKEDYKVYMVTPDKDFAQLVSENIFMYRPARMGNGIEIWGIPEVQKKFEVERPEQ
VIDFLGMMGDSVDNIPGLPGVGEKTAKKFLKQFGSMEGLLENTDQLKGKMKEKVIENAEL
GRLSKKLARIFTDCDVKFHAEDYELSMPDTDKVQEIFEELEFRRLKDQFIKLFSGEEDKT
QTQVSNSPSAKQNAKTAGAGQFSLFGEGGESIESTSSRKSLKDTPHVYQAVNTELSRKLF
MEKLMKQKSVCFDTETTSLNSLEAELVGIAFSWEAGKAYYIPFPEERKEAQALIEELRVF
FEDENIEKIGQNLKYDIEVLNKYDLKVEGKLFDTMIAHYLINPDMRHNMDVLAETYLNYS
PQPITDLIGKKGKNQGSMRDVALEKVTEYAAEDADITFQLKNFFEKELEEAQTRKLFDEI
EIPLVKVLADMEIEGINLDETYLKSLSNALSSDIKELETKIYEDAGEEFLISSPKQLGVI
LFEKLALVSKPKKTKTGQYSTSEDVLSALAPKHDIIQRVLDFRGLVKLQNTYVDALPNQV
EKTTGRVHTDYVQTIAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDKNFVLLAADYS
QIELRIIAALSQEENMIKAFKEGEDIHASTAAKVFNVPIEEVTREQRSNAKTVNFGIIYG
VSAFGLSNQTSLSRSEAKELIDTYYKTYPKLSNFISEQVEFAREHGYVSTVLGRRRYLKD
INSRNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHRKLKEENYKTKMLLQVHDELVFD
AHKDELDKVKAMIKQEMENAYKLDVPLDVDMGTGENWLEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaaaaacgcctttttttactcgatgcttacgcattaatttttcgtggttat
tatgcctttattaagaatccaaggatcaactccaaaggtttcaacacctctgcgatcatg
gggttcaccaattcactctttgatgtgataagaagagaaaaaccagatcaccttgcagtg
tgttttgataagaatggaagcgaagccaggacagaaatgttcacagagtacaaggccaac
agagatgaaactcccgaacccattagagaagccattccaattatacaggatattctgaga
gccatgcatatcccggtggtggaactctctggtatggaagcagacgatattataggaacc
cttgccaaacaggcagaaaaggaggattacaaagtatatatggtaactccagataaggat
ttcgctcagctggtttctgaaaacatctttatgtaccgcccggcacgaatgggtaatggc
atcgagatctggggaattccggaagttcagaagaaatttgaagtcgaaagaccggaacag
gtgatagatttccttggaatgatgggggactctgtagacaacattcctggattaccgggg
gttggtgagaaaacagcaaaaaagttcctgaagcaattcggcagtatggaaggcctgctg
gaaaacaccgatcagcttaaaggaaagatgaaagaaaaggtgatcgagaatgctgaactc
ggccgtctttctaaaaaactggccaggatatttacagattgtgatgtcaagttccatgca
gaagattatgagctttcaatgcccgacaccgataaggttcaggaaatattcgaggaactt
gagtttagaagattaaaggatcagtttataaaattattcagcggagaagaagataaaact
caaacccaggtttccaattcaccttcagcaaaacaaaatgcaaaaactgccggtgcagga
cagttctcattatttggagaaggcggagaatccatcgaatccacttcgtccagaaaaagc
ctgaaagacacgccacatgtgtaccaggctgtaaacactgagttatccagaaagttattc
atggaaaaactaatgaagcaaaaaagtgtttgcttcgataccgagaccacaagtttaaat
tcgctggaagcagaacttgttgggatcgcattttcatgggaggccggtaaagcctattat
attccgttccccgaggaaagaaaagaagctcaggcccttatcgaggagctgagggtgttc
tttgaagatgaaaatattgagaaaataggccagaaccttaaatatgatatagaggtactt
aataagtatgatctaaaggttgaaggcaaattgtttgacaccatgatagcgcattatctt
ataaatccggatatgcgccataatatggatgttctggcagagacttatttgaattatagt
ccgcagcctattacagaccttattggtaaaaaaggaaagaatcagggcagcatgcgtgat
gttgctttagagaaggtcaccgaatatgctgcagaagatgccgatatcacctttcagctg
aagaactttttcgaaaaagaactggaagaagctcagaccagaaaattattcgatgagatc
gaaattccattggtaaaggtgctggcagatatggaaattgaaggaataaatctggatgag
acctatctgaaatcactttctaatgcgctttcttcagacatcaaagaactggaaacaaag
atctatgaagatgccggggaagaatttctgataagttcacccaagcaacttggtgtgatc
ttatttgagaagcttgctttggtaagcaaacccaaaaagaccaaaaccggacaatattcc
accagcgaagatgtactatctgcactggctccaaaacatgacattattcagcgtgtgctg
gattttagaggacttgtaaaactacagaacacttatgtagatgccttgccaaatcaggta
gagaaaaccaccgggagagtacatacagattatgtgcagaccatagccgcaacaggaagg
cttagctccaataatcctaacctccagaacataccaattagaaccgagcgaggccgacag
gtgagaaaagcatttgtcccaagagataagaattttgttcttcttgctgcagattattcc
caaatagaactaaggatcatcgcggctttaagtcaggaagaaaatatgatcaaagccttt
aaggagggtgaagacattcacgcttctacggccgctaaagtctttaatgtgccaatagaa
gaagtgacccgtgagcagcgaagcaatgccaagacggtgaatttcggaatcatttatggg
gtttcggcatttggactaagcaatcaaacttcactttccagaagcgaggccaaagaattg
atagacacgtattataaaacttatccaaaactgagtaacttcattagcgaacaggtagaa
tttgccagagaacatggttatgtatctacggtgcttggaagacgtcgttatctaaaagat
atcaattcacgaaatcaggttgttcgcggtgctgctgagaggaatgcggttaatgcacct
attcagggaagcgcggcagacatcattaagatcgccatgatcaatattcacagaaagctg
aaagaagaaaattataagacaaaaatgctgcttcaggtacatgatgaacttgtgtttgat
gcacacaaggatgaactcgataaggtaaaagccatgatcaaacaggaaatggaaaacgcc
tataaactggatgttccattagatgtagatatgggaacgggagaaaactggctggaggcg
cattaa
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