Christiangramia salexigens: LPB144_11565
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Entry
LPB144_11565 CDS
T04586
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
grl
Christiangramia salexigens
Pathway
grl03030
DNA replication
grl03430
Mismatch repair
grl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
grl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB144_11565
03430 Mismatch repair
LPB144_11565
03440 Homologous recombination
LPB144_11565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
grl03032
]
LPB144_11565
03400 DNA repair and recombination proteins [BR:
grl03400
]
LPB144_11565
Enzymes [BR:
grl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB144_11565
DNA replication proteins [BR:
grl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB144_11565
DNA repair and recombination proteins [BR:
grl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB144_11565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Cytochrom_C_2
Intimin_C
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
APG61006
UniProt:
A0A1L3J792
LinkDB
All DBs
Position
2569005..2573390
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPLTDSENWPRCIQIAWQLHDDMGNLIENQDYLVKPDGFDIPY
DSERIHGISTDLANEKGIPLQEVLEKFNDALNRSKFVVGQNVGFDINIMGAEFIRMNFEN
SMQDMPVLDTCTEVTASLCKIPGGRGGKFKLPTLTELHEFLFDEAFAEAHNATADVEATT
RCFLELIRQRVYTVEELDVPNDYFENFSEANPQRIELIGLKHINLKKASDQIRKRLEKQQ
PTDDISHEEIQQNLEKLDEVPFAHLHNHSQFSVLQSTISIPDLVAAAAEENMNAVALTDH
ANMMGAFHFVKEVGVYNGKIKEHNATAEENGEELKQPMKAIVGCEFFVCENHADKSRKDN
GYQIVMLAKNKNGYHNLAKMSSKAYTDGFYYVPRIDKEIVKKYKEDVIVLTGNLYGEVPS
KILNVGEKQAEEALLWWKEEFGEDFYIELMRHNQEDENRVNPVLVEFSKKHDIKLVATNN
TYYWKQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNDEYYFKSGDEMKSLFKDLPE
AISNIQEVVDKVEPFELARDVLLPKFTIPEEFQSEEDLVDGGKRGENAFLKHITFEGAKK
RYSEVTPDIAERLNFELSVIENTGYPGYFLIVEDFIRAAREMGVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIKKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLMEADRIAKLIPNTKLGKLFAMDDKTIKAKFRGDEIEKIN
ELLNISEGDDLEAETVNQARILEGSVRNTGIHACGVIITPGDITNYVPVSVAKDSDLYVT
QFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKGRHNIDLDPDSFPLDDEETYKLFQRG
ETIGIFQYESPGMQKHMQALKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGDEEISYDL
PEMEEYLEETYGITVYQEQVMLLSQKLAGFSKGEADMLRKAMGKKIAALLAQLKPKFIGG
GEEKGHPTEVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNN
MNDIKQVTFFMEECKRMKLNVLGPDVNESYYKFSVNKENAIRFGMGAIKGVGAGAVATIV
ENRKNNEGPYRSIFDMAKRIDLRAANKKAFENLALAGGFDGFGSTHRAQYFHDDGNGMSF
LEKVIKYAAKYQESQNSSQVSLFGEASDVQIPEPEVPPCEEWGTMEKLRREKEVVGIYIS
GHPLDDFRIEMNYFCNGKLSDFRDLEAVVNRDLTIGGVVTDVQHRVSKNGKGWAIFTVED
YDESYEFKIFGEEYLRMKHFFVPNNFVHIKCFVKEGWTNKETGKKGEPRIQFREMNLLHD
VMDKNARKLTIQLNIDDLKNEKIEWLKETFTSHKGDCHLNFVVYEMKEQVKLRMPSRKHK
IRISQELIEALEKEQFMYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatttttgataccgaaaccaccggtcttcccaagcgctgggatgcaccactt
acagattctgagaactggccaagatgtatacagatcgcctggcagttacatgacgatatg
gggaatcttattgagaatcaggattatctggtgaagcccgacggttttgatatcccatat
gattcggaaaggatacatggtatttccacagatcttgcaaatgaaaaaggtattccctta
caggaagttctggagaaatttaatgatgccctgaatagatccaagttcgtggtagggcag
aatgttggttttgatatcaacattatgggagccgaatttatccgaatgaattttgaaaat
tcaatgcaggatatgccggtgcttgatacctgtactgaagttacggccagcttatgtaaa
attcccggtggacgtggtgggaaatttaaattacctactcttacagaactgcacgaattt
ctttttgatgaagcctttgccgaagcgcataatgcaacggccgatgttgaggcgactaca
cgttgttttcttgagcttatccgtcaaagggtatatacagtagaggagcttgatgttcct
aatgattatttcgagaatttttctgaagccaatcctcaaaggatagaactgatcggcttg
aagcatattaatcttaaaaaagcttcagaccagataaggaaaagacttgagaagcaacag
cctacagatgatatttcacatgaggagattcagcagaatctggaaaaactggatgaggtt
ccttttgcgcatctgcataaccattctcagttttccgtgcttcagtccacgataagtatt
cccgatctggttgccgcggcggcagaggagaatatgaatgcagtggcgcttaccgatcat
gccaatatgatgggggcttttcactttgtgaaagaagtaggggtctataatggaaaaatt
aaagagcataatgctacggctgaagagaatggtgaagagctaaaacagccaatgaaagct
attgtaggctgtgagttcttcgtttgtgaaaatcacgctgacaaaagccggaaagataat
ggttaccagatcgtgatgcttgctaagaacaagaatgggtatcataatctggctaaaatg
tcctctaaggcatatacagatgggttttactatgtgccgcgtatagataaggagatcgtt
aaaaagtataaagaggatgtgatcgttcttaccggtaatctttatggcgaggttcccagt
aagatcctgaatgtgggtgaaaaacaggcagaagaggctttgttgtggtggaaggaagag
tttggtgaagatttctatatagagctgatgcgccataatcaggaagatgagaacagggtg
aatcctgttcttgtggaattcagcaaaaagcatgatataaaactagttgcgaccaataat
acatattactggaaacaggaagatgcaaatgcacatgatattttactctgtgtaaaggat
ggtgaaaaacaggctactccaattggaagaggacgaggttatcgctacggacttcctaat
gatgagtattatttcaagtctggagatgagatgaaaagtcttttcaaagacctgccggaa
gcgatcagtaatattcaggaggttgtggataaggtggagccttttgaactcgcaagggac
gttttacttccaaaatttaccattcctgaagagtttcagagtgaagaggatcttgtggat
ggtggaaaacgaggtgaaaatgcctttttaaaacatataactttcgaaggcgctaaaaaa
cggtattcggaagtcactcccgatatcgcagaacgacttaacttcgaattgtctgtaatt
gaaaataccggttaccccggttacttccttattgtggaggatttcattcgagcggccaga
gagatgggagtttcggtagggccgggacgagggtctgctgcaggttctgcggtggcgtac
tgtcttggaattacaaatattgatcctattaaatatgatctgctttttgagcgtttctta
aatccggatcgtgtgagtatgcccgatattgatattgactttgatgatgaaggccgaagc
cgggtaatggactatgtgatcaagaaatacggggccaatcaggtggcacagatcatcacc
tatggtaccatggctgcaaaatcttcgattcgtgatacagcgcgtgtgctggaccttccg
ctgatggaagcagacaggattgcaaagctgatccccaataccaaacttgggaagcttttt
gccatggatgataagaccattaaggcgaaattccgtggtgatgaaatagaaaagatcaat
gagcttttaaatatttctgaaggagatgacctggaagctgaaaccgtgaatcaggctcga
attcttgaaggttcggttagaaataccggtatccacgcctgtggagtgatcattactccc
ggagatattaccaattacgttccagtatctgttgcaaaggattccgatctgtatgtaaca
caattcgataactcggttgtggaaagtgcaggactgctaaagatggatttcctgggtctt
aagactctaaccctgatcaaggatacggttaagatcgtaaaaggaagacataatatagac
ctggatccggatagtttcccattggatgatgaagaaacctataagttgttccagagagga
gaaacgattgggattttccaatatgaatctcccggaatgcagaagcatatgcaggcatta
aaaccaactgtttttgatgaccttatcgcgatgaacgcgttataccgtccgggacctatg
gaatatattcctagtttcattgcgcgtaaacatggagacgaagagatctcttatgatctt
cccgaaatggaggagtatctggaagaaacttacgggatcacggtttaccaggagcaggtg
atgcttctgtcgcaaaaactggcaggatttagtaagggtgaagccgatatgttaaggaaa
gcgatgggtaaaaagatcgctgccttacttgcgcaattaaaaccaaaattcattggtggt
ggtgaagaaaaaggtcatccaaccgaggttcttgagaagatctggaaagactgggaagct
tttgcttcttatgcctttaacaagtcccactctacctgttatgcatggatcgcttatcaa
accgcttatttaaaagcgcattatccagccgagtatatggcggcggtgctttccaataac
atgaatgatattaagcaggttacattctttatggaagaatgtaagcgaatgaagcttaat
gtacttgggcctgatgtgaatgaatcatattataaattctcggtaaataaagaaaatgct
atccgttttggaatgggagccattaaaggtgtaggtgcaggagctgtggcaaccattgtt
gaaaacagaaaaaataacgaagggccgtatcgctctatttttgatatggctaagagaata
gatcttagagccgctaacaaaaaagcttttgaaaaccttgcgcttgccggcggattcgat
ggttttggaagcactcacagagctcaatatttccatgatgatggtaacggaatgagcttc
cttgaaaaggtgatcaaatatgccgcaaaatatcaggagagtcagaattcgtcgcaggta
agtctttttggcgaagccagtgatgttcagatcccggagcctgaagtgccgccatgtgag
gaatggggtaccatggaaaaattaagacgggaaaaggaagttgtgggaatctatatttcg
ggacatccgctggatgatttcaggatagaaatgaattatttctgtaacggtaagctttca
gattttagggatctagaagccgttgtaaacagagaccttactattggaggtgtggttaca
gatgtgcagcatcgtgtttccaagaacggcaaaggttgggcaatttttacggtagaggat
tatgacgaatcttatgagtttaagatctttggcgaagagtacctgagaatgaaacatttc
tttgtgcctaataactttgtgcatattaagtgttttgtaaaagagggctggaccaataag
gaaaccggaaagaaaggggagcccaggatacagttcagagaaatgaacttactgcatgat
gtgatggataaaaatgctagaaagctcaccatccagttgaatattgatgatcttaaaaac
gaaaagatcgagtggttaaaggaaacttttacttcccataaaggggattgtcatttgaat
tttgtggtttacgaaatgaaggaacaggtcaagttgcgtatgccaagtagaaagcataaa
ataaggatctcgcaggagttgatcgaagctcttgagaaggagcagttcatgtataaattg
aattaa
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