Christiangramia fulva: C7S20_16010
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Entry
C7S20_16010 CDS
T05367
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
grs
Christiangramia fulva
Pathway
grs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S20_16010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grs03019
]
C7S20_16010
03009 Ribosome biogenesis [BR:
grs03009
]
C7S20_16010
Enzymes [BR:
grs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7S20_16010
Messenger RNA biogenesis [BR:
grs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7S20_16010
Ribosome biogenesis [BR:
grs03009
]
Prokaryotic type
rRNA helicases
C7S20_16010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_helical
DbpA
ResIII
AAA_22
HTH_CLF_N
Cas3-like_C_2
FrhB_FdhB_C
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AVR46647
UniProt:
A0A2R3Z8P1
LinkDB
All DBs
Position
3567367..3569127
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AA seq
586 aa
AA seq
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MNQFEELGLDQQVLQAIADMGFETPSEVQEKTIPILLDQETDLVALAQTGTGKTAAFGFP
LIQKISSESRKTQALILSPTRELCLQITNELKNYSKYKKSLQVVAVYGGASITDQSKQLQ
RGAQIIVATPGRMQDMIRRNLADISNIDYCILDEADEMLNMGFYEDIKSILSHTPNTKKT
WLFSATMPKEVAKIASKFMKNPVEITVGSKNMGTDNVSHEYYLVNHRYRYDALKRLADAN
PDIFSVIFCRTKRDTQKVAEKLIEDGYNAAALHGDLSQNQRDLVMKSFRTRQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKTGTSMVIISKSEVRKIKTIEKM
IQQQFVQKQIPGGKEICKTQLFHLASDIKKTEINHDIDPYLPSIMDVLEGFSKEELIKKV
FSVEFTRFYNYYKNAPELGSDITASKQSSDGSTRYFLGLGSKDGFDWKSLKDFLKEQLNL
ERDDVYKVDVKGSFSFFNTDDRLANHVLESFQNFNYQGRDVTIEITKEQSKERSPRRKFS
KYSDSDGFGGKKSGRRTRGRDGKKNGRKVSHGKNIENSIKRRRSKK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattcgaggaacttggtctggaccaacaggttttacaggccatagctgacatg
ggttttgaaacccccagcgaagtacaggaaaaaacaatcccaattttattagatcaggag
accgatcttgtggctcttgcccagaccggaacaggaaaaaccgctgcattcggatttcca
ttaattcagaaaatttcttctgaatcccggaaaacacaggcgttaatcctttctcccaca
cgagagctctgtcttcaaatcaccaatgagctgaagaactattccaaatacaaaaaatca
cttcaggtggtggctgtatatggaggagcgagcattaccgatcagtccaaacagcttcaa
agaggcgcacagatcattgtggctactccgggaaggatgcaggatatgataagaagaaat
ctggccgatatatcgaatatcgattattgtattcttgatgaagccgatgaaatgctgaat
atgggcttttatgaagatatcaaatcgatactttcgcatacgccaaataccaaaaaaacc
tggcttttttctgcgaccatgccaaaagaggtcgctaaaatcgcctctaaattcatgaaa
aatccggtagaaataaccgtgggctctaaaaatatgggtaccgataatgtttctcatgaa
tattacctggtaaaccatcgttatcgttacgatgcccttaaaagactggccgacgcgaat
cccgatatattttcggtgatcttctgccgcacaaaaagagatactcaaaaagttgccgaa
aaacttattgaagatggctacaatgcagctgcacttcatggggatttaagtcagaaccag
cgtgacctggtaatgaagagtttccgtacaagacaaatccagatgctggtagcgactgat
gttgctgcgcgaggaattgacgttgatgatatcactcacgtgataaattatcagcttccc
gatgaaattgaaacttacacccaccgtagcggacgtacgggacgcgccggaaaaaccggg
acttccatggtgatcatctccaaaagtgaggtcaggaagattaaaaccatcgaaaagatg
attcagcagcaatttgtacaaaaacaaattcctggtggaaaagagatctgcaagactcag
cttttccacctggccagcgacataaagaaaaccgagatcaaccatgatatcgatccatat
ttgccttccataatggatgttcttgaaggtttttcaaaagaagagctgatcaaaaaagtt
ttttcggttgaattcacacgtttttataattactataaaaatgctcctgaacttggttct
gatattaccgcgtccaaacaatcttcagatggttctacacgttacttcctgggcttgggc
tcaaaagacggttttgactggaaaagccttaaagatttcctgaaagaacaattgaacctg
gaacgcgatgatgtttataaggtagatgttaaaggcagtttttcattctttaataccgat
gaccgccttgcgaaccatgtactggaaagttttcagaatttcaattaccagggtcgtgat
gtgactattgaaatcaccaaagaacagagcaaagaaagatcaccaagaagaaaattcagt
aaatattcagattctgatggctttggaggtaagaaatctggccgaagaacaaggggacgt
gatggaaagaaaaacggtcgcaaagtgagtcacggtaaaaacatcgagaattcaataaaa
cgaagaagatctaagaaatag
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