Christiangramia fulva: C7S20_16465
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Entry
C7S20_16465 CDS
T05367
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
grs
Christiangramia fulva
Pathway
grs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S20_16465 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grs03019
]
C7S20_16465 (rny)
Messenger RNA biogenesis [BR:
grs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7S20_16465 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF99
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AVR46730
UniProt:
A0A2R3Z8Y9
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Position
complement(3672143..3673705)
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AA seq
520 aa
AA seq
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MDILIIAIAAIIGIALGFGIAKILEKKQASQTIADAKKEAAGIIKEAKTEGESIKKDKIL
QAKEKFIELKSEHEKVILTRDKKINDAEKRIKDKESHVSNELSKNKKLNKELEDKVADYN
HRLDFLEKKQEEIDKLHSSKVQQLEVISGLSAEEAKAQLVESLKETAKADAMALIQDTVE
EAKLTAQQEAKKIIINTIQRIGTEEAIENCVSVFNLESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTSKQIEEEII
DIGKRTVIDLGIHGLQPELIKMVGRMKYRSSYGQNLLQHSREVSKLCGVMAAELGLNPKL
AKRAGLLHDIGKVPETETEVPHAILGMQWAEKYGEKPEVCNAIGAHHDEIEMNSLLSPIV
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVKKAYAIQAGRELRVIVESDKVT
DDKAANLSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacatattgatcatagcgatagccgccattatagggattgccctggggtttggaatc
gcaaaaatactggagaaaaagcaggcgtcacaaactatagctgatgcaaagaaagaagcc
gccggtattataaaagaggccaaaacagaaggagaaagcatcaaaaaagacaagatcctt
caggccaaagagaaatttattgaacttaaatcggaacatgaaaaagtaattttaacacgt
gataaaaagatcaatgatgccgaaaagaggatcaaagacaaagaatctcatgtttccaat
gaactttcaaaaaacaaaaagcttaacaaagaactcgaagataaagtagccgattacaat
catcgtttagattttctcgagaagaaacaggaagaaattgataaacttcacagcagtaaa
gtacagcagctcgaggtgatctctggactttcagccgaagaagccaaggcccagcttgta
gaatcgttaaaagagactgcaaaagccgatgccatggccctcatccaggatactgtagaa
gaagcgaaacttaccgcccagcaagaggctaaaaagatcattatcaacaccattcaacgg
ataggaactgaagaagccattgagaattgcgtatcggtattcaaccttgaaagtgatgac
gtaaaaggaaggattattggccgtgaaggtcgaaatattcgtgcccttgaagcagcaaca
ggagtagagatcatcgttgatgatactcctgaagcaatcattttaagttgttttgattct
gtaagaagggaagtggcaaggctttcattgcataaactggtaaccgacggcaggatccat
cctgcgcgtattgaagaagtggtgaagaaaaccagtaagcaaattgaagaagaaattatt
gatattggtaaaagaaccgtaattgatcttggaatccacggtttacagcccgaattgatt
aaaatggtagggagaatgaaataccgttcttcttatggccagaacttattacaacattct
cgtgaagtttctaaactttgtggagtgatggctgcagaattgggattgaatccgaaactg
gcaaaacgcgccggtttactgcatgatatcgggaaagtcccagaaaccgaaacagaggtt
cctcacgccatcctcggtatgcaatgggcggagaaatacggtgaaaaacctgaagtttgc
aacgctattggagcccaccatgatgaaattgaaatgaattcattactctcaccaattgtt
caggtttgtgatgcgataagtggagcaagaccaggagccagaagacaggttctggatagc
tacatccagagattgaaagatcttgaagatatagcttttggttttggtggcgtcaagaaa
gcctatgctattcaggccgggcgggaattgcgagtaatagtggaaagtgataaagtgacc
gatgataaagctgcaaatctttcttttgagatttcacaaaaaatccaaacagatatgacc
tatcccggtcaggtaaaagtgacagtgatcagggaaacccgggctgtcaatgttgccaaa
taa
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