Gordonia rubripertincta: GCWB2_00605
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Entry
GCWB2_00605 CDS
T05629
Symbol
gabD1
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00250
Alanine, aspartate and glutamate metabolism
gru00310
Lysine degradation
gru00350
Tyrosine metabolism
gru00650
Butanoate metabolism
gru00760
Nicotinate and nicotinamide metabolism
gru01100
Metabolic pathways
gru01120
Microbial metabolism in diverse environments
Module
gru_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
GCWB2_00605 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GCWB2_00605 (gabD1)
00310 Lysine degradation
GCWB2_00605 (gabD1)
00350 Tyrosine metabolism
GCWB2_00605 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
GCWB2_00605 (gabD1)
Enzymes [BR:
gru01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
GCWB2_00605 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
GCWB2_00605 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
GCWB2_00605 (gabD1)
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Motif
Pfam:
Aldedh
LuxC
Motif
Other DBs
NCBI-ProteinID:
ASR00958
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Position
135012..136565
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AA seq
517 aa
AA seq
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MPKPTAEYFARLGALVAIDDAASRPTRSVLEAFSGTEMATIPVATAEDLETAVARGRQAQ
QGWAARTPAERAQVIDKFSDLVFRNAESLMDIAQAETGKARIYAQEEVIDVAITARHYAT
AGPKLLADRKVKGMLPGATSVRVRHLPKGVIGVISPWNYPLTLAVSDAVAALVAGNGVVV
KPDSQTPYCALALAELLYEAGLPRELYAVVPGPGSVVGQAIMASTDYVMFTGSSATGATL
AEQAGRRLIGFSAELGGKNPMVVTANADIANAVQGAARAAFSNSGQLCISIERIYVDKRI
ADEFAERFAAFVSMMKLSGTYDFTADMGSLASAAQIDTAEAHVQDAVAKGAKVLAGGKRR
PDLGPFFFEPTVLTDVTDDMVCYGNETFGPVVSIYPVDSTDEAIKLANDTEYGLNASVFA
GSSAEAQAVAERLRAGTVNINEGYAAAWASTAAPMGGMGISGVGRRHGEEGLLKYTEAQT
IAEQRFIGIDRAPLVPKNVYRAITPTAVRALKYLPGR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcccaccgccgaatacttcgcccgtctcggggcgctcgtcgcgatcgacgac
gccgcgagccgtcccacccggtcggtgctcgaggccttcagcggcaccgagatggccacc
atcccggtcgcgacggccgaggacctcgagaccgcggtcgcccgcgggcgccaggcgcag
cagggatgggccgcccggaccccggccgaacgcgcccaggtcatcgacaagttctccgac
ctcgtctttcgcaacgccgagtcgttgatggacatcgcgcaggccgagaccggcaaggcc
cggatctacgcgcaggaggaagtgatcgacgtcgcgatcaccgcgcgtcactatgcgacc
gccggacccaagctgctcgccgaccgaaaggtcaagggcatgctgcccggcgcgaccagc
gtccgggtgcgtcacctgcccaagggcgtcatcggcgtgatcagcccgtggaactacccg
ctgacgctcgccgtctcggacgccgtcgcggcactcgtcgccggcaacggtgtggtcgtc
aagcccgacagccagaccccgtactgcgctctggcgctggcggaactgctgtacgaggca
ggtctcccgcgtgagctgtacgcagtggtcccgggaccgggaagcgtcgtggggcaggcg
atcatggcctcgaccgactacgtgatgttcaccgggtcgtcggccaccggtgccaccctc
gccgagcaggcggggcgtcggctcatcggtttctcggccgagctgggcggcaagaacccg
atggtcgtcaccgcgaacgccgacatcgccaacgccgtgcagggcgctgcgcgcgccgcg
ttctccaactccggccagctctgcatctccatcgagcggatctacgtcgacaagcggatc
gccgatgagttcgccgagcgtttcgcggcatttgtctcgatgatgaagctctcgggcact
tacgatttcaccgccgacatgggttcgctggcctcggccgcacagatcgacaccgccgag
gcacacgtccaggacgcggtcgccaagggcgccaaggtcctcgccggcggcaagcggcgt
cccgacctcggcccgttcttcttcgagccgacggtgctgacggacgtcaccgacgacatg
gtctgctacggaaacgagaccttcggcccggtcgtctcgatctacccggtcgactcgacc
gatgaggccatcaagctcgccaacgacaccgaatacggcctcaacgcaagcgttttcgcc
ggtagtagcgccgaggcgcaggccgtcgccgagcggttgcgggccggcaccgtgaacatc
aacgaggggtacgccgccgcctgggcgtcgaccgccgcgccgatgggtggcatgggtatc
tccggtgtgggccgacgccacggcgaagagggcctcctcaaatacaccgaggcacagacg
atcgccgagcagcgcttcatcggcatcgaccgcgccccgctggtccccaagaacgtctac
cgggccatcacgccgacagccgtccgcgcactgaagtaccttcccggccgctag
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