Gordonia rubripertincta: GCWB2_01000
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Entry
GCWB2_01000 CDS
T05629
Symbol
embB
Name
(GenBank) putative arabinosyltransferase B
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
gru
Gordonia rubripertincta
Pathway
gru00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
GCWB2_01000 (embB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gru01003
]
GCWB2_01000 (embB)
Glycosyltransferases [BR:
gru01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GCWB2_01000 (embB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
DUF3413
Motif
Other DBs
NCBI-ProteinID:
ASR01037
LinkDB
All DBs
Position
complement(229595..232873)
Genome browser
AA seq
1092 aa
AA seq
DB search
MSEPNRTAKIVAVVTGLLGFLLAIVTPILPVNQTTAELEWPQGDSVSDVAAPLVAFVPID
MDMSVPCSLTSRLPAQGGVLLSTTPEGGQDDSARGLFVRATPDALTMTDRNVVLLNTDRA
AAQANPDCRIVMHADGEGVAGRFEGLPAPDADTGSLHEFAIPDHEMRPQIVGIYSDLPAD
VSRDGLSLHATIDTRYVSSPTPLKLAAIVIGIVMTVLSLIALGVLDRRDGRAHKRFLPTG
WWTIRPPDVAVFAILAFWWFAGANTSDDGYNFTVGRITSEAGYADNYFRYFGVPQDPFGW
HFQVISWMSHISVATPFMRLPAFLLGLLGWWLISREVIPRLGRAVRNSRPAVWSAAFVFL
AIWLPFNNGLRPEPAEAVGALLTWCCVERAIATRRLLPYAIAVVTAAFTLALAPGGLMAV
AALLAGIRPIVKTLVSRRSRDGLLPMLAPILAAGTAVLFQIFFDQPIGALIAGNKVASDV
GPTLEWWQEPIRYYYLILPTADGTLARRFGVLAMILCLFVVLLRLLRREHPNGVARAPIW
RLVAVTLGTMFFIAFTPTKWTHHFGVYAGIAAGLAAAAGAMMAPAVLRSRRNRTFFAAAV
LAITGISFAGTNGWWFVGSYGVPWWDRPPTVGGVNVAWFILLAAIVTALAGLWFHFRDDF
VDEQTRTRGGDRWYSKLKFSPLPVISGLMVLFMVASFLKGAYEQRDSWSWMKSNARALTG
NSCGLANDVLVEADPTAGLLAPAAVNGRPAPGVAQALSGTDPTGFTPNGVPDKLSVDATE
SDTPSTTSAQNTAQTGAGADESGDSSSAQGGTEGGQGARGINGSTVRLPFGLNPVVTPVL
GSYGSPSGTASLTTDWYQLPERSDDAPLLTMAVAGSVEAVDGIGVVHAGQKVVAQFGRVG
ADGRVVPTGQMFPIDIGEVPTWRNLRFPLADSPAQSTVVRILVEDTAAASSEWVAITPPR
VSKLATLDEVVGRTDPVFIDWLPGLVFPCQQPMKVRHGVLEVPKWRIMPDAEATRKNSQT
WMSGTAGGPLGITEAMLRPTLMPTYLRNNWGRDWGGLQRFTEIIPAPPAEIELGEARRSG
LYDPAPMRSSGY
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacccaaccgcaccgccaagatcgtcgccgtcgtcacgggcctgcttggcttc
ctgctcgcgatcgtcacgccgatcctgccggtcaaccagaccaccgcggaactcgagtgg
ccgcaaggtgactcggtatcggatgtggcggcaccgctggtggccttcgtcccgatcgac
atggacatgtcggtgccctgttcgctgacgtcccgattgcctgcccagggcggggtcctg
ctctccacgacgccggaaggcggtcaggacgactccgcccgcggtctcttcgtccgcgcc
accccggacgccctgacgatgaccgaccgcaacgtggtgctgctcaacaccgatcgtgcc
gcggcacaggcgaacccggactgccgcatcgtcatgcacgccgacggtgagggcgtcgcc
ggtcgcttcgagggtctgcccgccccggacgccgacaccggcagcctgcacgagttcgcc
atccccgaccacgagatgcgtccgcagatcgtcgggatctacagcgatctcccggccgac
gtgtcccgcgacggcctgtcgttgcacgcgaccatcgacacccgctacgtctcctcgccg
acgccgctcaagctcgccgcgatcgtcatcggcatcgtgatgacggtcctgtcgctgatc
gcgctcggcgtactagaccgccgggacggccgcgcacacaagcgtttcctgccgaccggc
tggtggaccatccgcccgcccgacgtcgcggtcttcgcgatcctcgccttctggtggttc
gccggcgccaacacctccgacgacggttacaacttcaccgtcggccgcatcaccagcgaa
gccggctacgccgacaactacttccgctacttcggcgtcccgcaggacccgttcggctgg
catttccaggtcatctcgtggatgtcgcacatcagcgtcgccacgccgttcatgcgcctg
cccgccttcctcctcggacttctcggctggtggctcatcagccgtgaggtgatcccgcgc
ctggggcgcgcggtccgcaacagcagaccggcggtgtggtcggccgcgttcgtcttcctg
gcgatctggttgccgtttaacaacggtttgcgtccggagccggcggaagcggtgggcgcg
ctgctcacgtggtgctgcgtggaacgggcgatcgcgacgcggcgcctgctgccgtacgcg
atcgcggtcgtgaccgcggcgttcaccctcgccctcgcccccggcgggctgatggccgtc
gcggcgctcctcgccggtatccggccgatcgtgaagaccctggtgtcgcgccgttcccgt
gacggactcctgccgatgctggcgccgatcctggcggccggcaccgcggtcctcttccag
atcttcttcgaccagccgatcggcgcgctcatcgccggcaacaaggtcgcatccgacgtc
ggcccgacgctcgagtggtggcaggaaccgatccggtactactacctgatcctgccgacc
gccgacggcacgctcgcccgtcgcttcggcgtcctcgcgatgattctgtgcctgttcgtc
gtactcttgcgcctgctgcgtcgtgaacatcccaacggcgttgcgcgcgcaccgatctgg
cgattggtggcggtcacgctgggcactatgttcttcatcgccttcaccccgaccaagtgg
acccaccacttcggcgtctacgcgggtatcgccgccggtctcgctgccgcagcgggcgcg
atgatggcgccggccgtccttcggtcgcggcgtaaccgcacgttcttcgcggccgccgtg
ctcgcgatcaccgggatctccttcgccgggaccaacggctggtggttcgtcggcagctac
ggcgtgccgtggtgggaccgcccgccgaccgtcggcggcgtcaacgtcgcgtggttcatc
ctgctcgcggcgatcgtcaccgcactggctggtctgtggttccacttccgcgacgacttc
gtcgacgaacagacccgaacccgcggtggtgaccgctggtactcgaagctcaagttctca
ccgctgccggtgatctcgggactgatggtgctgttcatggtcgcgtcgttcctgaagggc
gcctacgagcagcgcgactcctggtcctggatgaagtccaatgcgcgtgccctgaccggc
aattcgtgcggcctggccaacgacgtcctggtcgaggccgatccgacggcgggcctgctg
gctcccgcagcggtgaacggccgcccggcacccggcgtcgcacaggcattgtcgggcacg
gatcccaccggcttcacacccaacggggttcccgacaagctgtcggtggacgccaccgag
agcgacaccccgtccaccacgagcgcccagaacaccgcgcagaccggtgccggcgcggac
gagtccggcgactcgtcgtcggcgcagggtggcaccgagggcggccagggcgcacgcggc
atcaacgggtcgacggtccgcctgccgttcggcctgaacccggttgtcacaccggttctc
ggcagctacggatcgccgtcgggcaccgcctcactgaccacggactggtaccagttgccc
gaacgttccgacgacgccccgctgctcaccatggcggtcgccggatcggtcgaggccgtc
gacggcatcggtgtcgtccacgcgggccagaaggtggtcgcgcagttcggtcgcgtcggc
gccgacggtcgcgtggtgccgacgggccagatgttccccatcgacatcggcgaggtcccg
acgtggcgcaacctgcggttcccgctggccgattcgccggcccagtcgaccgtggtgcgc
atcctggtcgaggacaccgccgcggcgtcgtcggagtgggtggccatcaccccgccgcgc
gtcagcaagctcgcgacgctcgacgaggtcgtcggccggaccgatccggtgttcatcgac
tggctgcccggcctggtcttcccctgccagcagccgatgaaggtgcggcacggtgtgctc
gaggtgccgaagtggcggatcatgcccgacgccgaggccacccggaagaacagccagacc
tggatgtcgggcaccgcgggcggaccgttgggcatcaccgaggcgatgctgcgtccgaca
ctgatgccgacgtacctgcgcaacaactggggacgtgactggggcggtctgcagcggttc
accgagatcatcccggcgccgcccgccgagatagagctcggcgaggcacgacgctcgggg
ctgtacgaccccgcgccgatgagatccagcggctactga
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