Gordonia rubripertincta: GCWB2_01960
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Entry
GCWB2_01960 CDS
T05629
Symbol
fadJ1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00071
Fatty acid degradation
gru00280
Valine, leucine and isoleucine degradation
gru00310
Lysine degradation
gru00362
Benzoate degradation
gru00380
Tryptophan metabolism
gru00410
beta-Alanine metabolism
gru00640
Propanoate metabolism
gru00650
Butanoate metabolism
gru00907
Pinene, camphor and geraniol degradation
gru00930
Caprolactam degradation
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01120
Microbial metabolism in diverse environments
gru01200
Carbon metabolism
gru01212
Fatty acid metabolism
Module
gru_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GCWB2_01960 (fadJ1)
00650 Butanoate metabolism
GCWB2_01960 (fadJ1)
09103 Lipid metabolism
00071 Fatty acid degradation
GCWB2_01960 (fadJ1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GCWB2_01960 (fadJ1)
00310 Lysine degradation
GCWB2_01960 (fadJ1)
00380 Tryptophan metabolism
GCWB2_01960 (fadJ1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GCWB2_01960 (fadJ1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GCWB2_01960 (fadJ1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GCWB2_01960 (fadJ1)
00930 Caprolactam degradation
GCWB2_01960 (fadJ1)
Enzymes [BR:
gru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GCWB2_01960 (fadJ1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GCWB2_01960 (fadJ1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GCWB2_01960 (fadJ1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
AlaDh_PNT_C
DAO
NAD_binding_2
UDPG_MGDP_dh_N
F420_oxidored
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ASR01222
LinkDB
All DBs
Position
complement(435035..437191)
Genome browser
AA seq
718 aa
AA seq
DB search
MPDINIIRWDRREDGIVVLTIDDPSKSSNTMTREYVASMGATVDRLYAEVESIKGVVLTS
GKKTFFAGGDLNDILALSPDAAEEFFATAETIKADLRRLETLGRPVVAAINGAALGGGLE
IALACHHRVAVASAPVGLPEVNLGLLPGGGGVTRTVRMFGITKALTEILLTGTPFRGDKA
VAVGLVDEVVESPWSLVDTAITWISQNPEAAQPWDDKKYRIPGGTPSTPSFAAILPSLPA
TLRKQTKGANLPAPIAIMSAAVEGTQVDFDTASTIESRYLTKLATGQVAKNMISTFFFDA
NHIKSGGSRPDGHPTRKVSKVVVLGAGMMGAGIAYVCAKAGIEVILKDVSLERAEKGKAY
SESIVRKGIERGQVSAEKGQALLDRITPTERAEDAQGADLVIEAVFEDPALKNTVINEVI
PFLTDDALLGSNTSTLPITGLAEGVERSDAFIGLHFFSPVDKMDLLEIIVGKQTSDESLA
RAFDFAQQIAKTPIVVNDSRGFFTSRVIGKFLDEAIAMVGEGIEPASVEQAGMQAGYPAP
PLALYDELTLTLPRKIRDETKAATIAEGNAWVTHGSEAVVDHLIDEFDRKGRSTGAGFYD
YVDGKRAALWPGLRTTFGSTPPTISIEDMKERMLFAEAIDTVKCLDEGVLRSTADANIGS
VYGIGFPAWTGGVIQYINGYPGGLQAFVKRADELHKLYGPRFEPTDSLRAKAAAGETF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatatcaacatcattcgctgggatcgtcgtgaggacggcatcgtcgtcctcacc
atcgatgacccgtccaagtcctccaacaccatgacccgcgagtacgtggcgtcgatgggt
gcgaccgtcgatcgcctgtacgccgaggtggagtcgatcaagggcgtcgtcctgacctcg
gggaagaagaccttcttcgccggcggcgacctcaacgacatcctggccctgtcccccgac
gcggcagaagagttcttcgccaccgccgagacgatcaaggccgatctccgacgcctcgaa
accttggggcgcccggtcgtggccgccatcaacggcgccgcgctcggcggcggcctcgag
atcgcactcgcctgccaccaccgcgtggccgtggcctccgctccagtcggcctccccgag
gtcaatctgggtctgcttcccggcggcggcggggtcacccgcaccgtccggatgttcggt
atcaccaaggcactgaccgagatcctgttgaccggtacgccgttccgcggtgacaaggcc
gtggccgtcgggctcgtggacgaagtggtcgagtccccctggtcgctcgtcgacaccgcc
atcacgtggatctctcagaatcctgaggccgcgcagccgtgggacgacaagaagtaccgg
atccccggcggcaccccatcgaccccgtccttcgccgccatccttccgtcgctaccggcg
acgctgcgcaagcagaccaagggtgcgaacctcccggccccgatcgcgatcatgtcggcg
gccgtggaaggtacccaggtcgacttcgacaccgcgtcgacgatcgagagccgctacctc
accaagctcgccaccggccaggtcgccaagaacatgatctccacgttcttcttcgacgcc
aaccacatcaagtccggcggctcccgacctgacggccatccgacccgcaaggtgtcgaag
gtcgtcgtgctcggcgccgggatgatgggtgccggaatcgcctacgtctgcgcgaaggcc
ggcatcgaggtcatcctcaaggacgtcagtcttgagcgtgccgagaagggcaaggcgtac
tcggaatcgattgtgcgcaagggtatcgagcgcggccaggtgtcggcggagaaggggcaa
gcgctcctcgaccggatcaccccgaccgagcgcgccgaggacgcacagggcgccgacctc
gtcatcgaggcggtgttcgaggaccccgcgctgaagaacaccgtcatcaacgaggtcatc
ccgttcctcaccgacgacgcactcctgggttcgaatacctcgaccctgccgatcaccgga
ctcgccgaaggcgtggagcgctccgatgccttcatcggcctgcacttcttctccccggtc
gacaagatggatctactcgagatcatcgtcggcaagcagaccagcgacgaatccctggca
cgcgccttcgatttcgctcagcagatcgccaagaccccgatcgtggtcaacgacagccgc
ggcttcttcaccagccgcgtcatcggcaagttcctcgacgaggccatcgccatggtgggc
gagggcatcgaaccggcatcggtcgaacaggccgggatgcaggccgggtacccggcgccg
ccgctcgctctctacgacgaactgacactgactctcccgcgcaagatccgcgacgagacc
aaagcggcgaccatcgccgagggcaacgcatgggtgactcacggctccgaagccgtggtc
gaccacctcatcgacgagttcgaccgcaagggacgctcgaccggtgcaggcttctacgac
tacgtcgacggcaagcgcgccgctctctggccggggctacgtacgaccttcgggtccacc
ccgccgaccatctcgatcgaagacatgaaagaacgcatgctgttcgccgaggcgatcgac
accgtcaaatgcctcgacgagggggtcctgcggtccaccgccgacgccaacatcggttcg
gtctacggcatcggcttccccgcctggaccggcggagtgatccagtacatcaacggatac
cccggtggtctccaggcattcgtcaagcgtgccgacgagctccacaagctttacggcccg
cgtttcgaaccgaccgactcgctccgcgcgaaagcggctgcaggcgagacgttctga
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