Gordonia rubripertincta: GCWB2_02800
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Entry
GCWB2_02800 CDS
T05629
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00521
Streptomycin biosynthesis
gru00523
Polyketide sugar unit biosynthesis
gru00525
Acarbose and validamycin biosynthesis
gru00541
Biosynthesis of various nucleotide sugars
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01250
Biosynthesis of nucleotide sugars
Module
gru_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GCWB2_02800 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GCWB2_02800 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
GCWB2_02800 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GCWB2_02800 (rmlB)
00525 Acarbose and validamycin biosynthesis
GCWB2_02800 (rmlB)
Enzymes [BR:
gru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GCWB2_02800 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
B12D
Motif
Other DBs
NCBI-ProteinID:
ASR01387
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All DBs
Position
complement(604830..605834)
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AA seq
334 aa
AA seq
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MRVLVTGGAGFIGANFVLRTLATRPDVTIRVLDKLTYAANPETLAPVADRVELIEGDIAD
AALVDKLVGEADLVVHFAAESHNDNSLADPSAFVHTNLVGTYTLLEAVRAHQVRYHHIST
DEVYGDLDLDDPARFTEATAYNPSSPYSSTKAGSDLLVRAWVRSFGVAATISNCSNNYGP
YQHIEKFIPRQITNVLSGVRPKLYGDGRNVRDWIHVDDHNDAVWTIIDKGRIGETYLIGA
DGEVDNRTVVETILELLGRPADAFDFVTDRPGHDRRYAIDSTRLRTELGWTPNYVDFRAG
LAATIDWYRDNTDWWQPAKDAVEQKYAATERVTG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgttctcgtgaccggtggtgccggtttcatcggcgccaacttcgtgctgcgcacc
ctggccacccgccccgacgtgacgatccgggtactggacaaactcacctacgccgccaac
cccgagaccctggccccggtcgccgaccgcgtcgaactcatcgaaggcgacatcgccgac
gccgccctggtcgacaagctggtgggcgaggccgatctggtggtgcatttcgccgccgaa
tcccacaacgacaactccctggccgacccgtcggccttcgtacacaccaacctcgtgggc
acctacaccctgctcgaagccgtgcgcgcccatcaggtgcgctaccaccacatcagcacc
gacgaggtctacggcgacctcgacctcgacgaccccgcccgcttcaccgaagccaccgcc
tacaacccgtcgagcccctactcgtcgacaaaagccggctccgacctgctcgtgcgcgcc
tgggtgcgttccttcggcgtcgccgcgaccatctccaactgctccaacaactacggcccg
taccaacacatcgagaaattcatcccccgccagatcaccaacgtgctctccggggtacgt
cccaagctctacggcgacggccgcaacgtgcgcgactggatccacgtcgacgaccacaac
gacgccgtgtggaccatcatcgacaaaggtcggatcggcgaaacctatctgatcggcgcc
gacggcgaggtcgacaaccgcaccgtcgtcgaaaccatcctcgaactcctcggccggccg
gccgatgcgttcgacttcgtcaccgaccgccctggccacgaccgccgctacgccatcgac
tccacccgcctacgcaccgaactcggctggacccccaactacgtcgacttccgcgccggc
ctggccgccaccatcgactggtaccgcgacaacaccgactggtggcagcccgccaaggac
gccgtcgaacagaagtacgccgccaccgagcgggtaacgggctga
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