Gordonia rubripertincta: GCWB2_02920
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Entry
GCWB2_02920 CDS
T05629
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00730
Thiamine metabolism
gru01100
Metabolic pathways
gru01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GCWB2_02920 (thiC)
Enzymes [BR:
gru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GCWB2_02920 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASR01411
LinkDB
All DBs
Position
complement(628937..630628)
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AA seq
563 aa
AA seq
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MGTRVSTAPTTATFTDGGLTTGPIEGSSKHYLSVDHLRVPQRRIHLTNGEHLDVYDTSGP
YTDPDAVIDVERGLPPTRDAWHRPEPVDGASTQLAWARAGIVTDEMRFIAAREGVDPDLV
RSEVAIGRAVIPANHRHPESEPMIIGKRFAVKINANIGNSAVRSSIADEVEKMVWATRWG
ADTIMDLSTGADIHTTREWILRNSPVPVGTVPIYQALEKVNGDPVALTWEIYRDTVIEQA
EQGVDYMTVHAGVLLRYVPLTARRVTGIVSRGGSIMAAWCLAHHEESFLYTHFDELCEIF
RRYDITFSLGDGLRPGSIADANDEAQFAELRTLGELTSIAKSHGVQVMIEGPGHIPMHKI
VENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEHLG
LPDRDDVKVGVITYKIAAHSADLAKGHPRAQERDDALSKARFEFRWVDQFNLALDPDTAR
EYHDETLPAEPAKTAHFCSMCGPKFCSMRISADVRAYAEENNLVTAEDIDRKIAEGMAAK
SAEFAEAGNRVYLPLETGPGGSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacgtgtatccaccgcacccaccactgcgacattcacagacggcggtctgacc
accgggccgatcgagggcagctccaagcactacctctccgtcgatcacctccgcgtaccg
cagcgtcgaatccacctgacgaacggtgagcacctcgacgtctacgacacctccgggccg
tacaccgaccccgatgccgtgatcgacgtggagcgcggcctgccacccacccgggacgcg
tggcaccgcccggaacccgtcgacggcgcgagcacccaactcgcctgggcgcgagcgggg
atcgtcaccgatgagatgcggttcatcgcggcacgggagggcgtcgaccccgacctggtc
cgctccgaggtggccatcggccgcgccgtcatcccggccaaccatcgtcatccggagtcg
gagccgatgatcatcggcaagcggttcgcggtgaagatcaatgcgaacatcggcaattct
gcggtgcgcagttcgatcgcggacgaggtcgagaagatggtgtgggccacccgatggggc
gccgacaccatcatggacctgtccaccggcgccgacatccacaccacccgggagtggatt
ctgcgcaactcccccgtgcccgtcgggaccgtgccgatctaccaggccctcgagaaggtg
aacggcgatcccgtcgctctcacgtgggagatataccgcgacaccgtgatcgagcaggcc
gagcagggtgtcgactacatgacggtgcatgccggagtgcttctccgctatgtgccgctg
accgcccggcgggtcaccggcatcgtctcgcggggcggatcgatcatggccgcctggtgc
ctggcgcaccacgaagagtcgttcctgtacacgcacttcgacgaactgtgcgagatcttc
cgccgctacgacatcaccttctccctcggcgacggactgcgtccggggtcgatcgccgac
gccaacgacgaggcccagttcgccgaactgcgaaccctcggcgaactgacctccatcgcg
aaatcccatggcgtgcaggtgatgatcgagggcccgggacacatcccgatgcacaagatc
gtcgagaacgtgcgtctcgaagaagaactctgcgaggaggcgccgttctatacgctcggc
cccctcgccaccgacatcgcacccgcctacgaccacatcacctccgccatcggcgcggcg
atgatcgcccaggcgggcacggccatgctctgctacgtgacacccaaggagcacctcggg
ctgcccgaccgggacgacgtgaaggtcggcgtcatcacctacaagatcgcggcccactcg
gcggatctcgcgaagggacatccgcgggcgcaggaacgtgatgacgcattgagcaaggcg
cgcttcgagttccgttgggtcgaccagttcaacctcgccctcgacccggacaccgcccgc
gagtatcacgatgagaccctgccggccgagcccgcgaagaccgcgcacttctgctcgatg
tgcggtcccaagttctgctcgatgcggatctccgccgacgtgcgcgcctacgcggaggag
aacaacctggtgaccgccgaagacatcgaccgcaagatcgccgaagggatggcggcgaag
tcggccgagttcgccgaggcgggcaaccgcgtgtacctgccgctcgaaaccggtcccgga
ggttctgcgtga
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