KEGG   Gordonia rubripertincta: GCWB2_03460
Entry
GCWB2_03460       CDS       T05629                                 
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gru  Gordonia rubripertincta
Pathway
gru00010  Glycolysis / Gluconeogenesis
gru00020  Citrate cycle (TCA cycle)
gru00260  Glycine, serine and threonine metabolism
gru00280  Valine, leucine and isoleucine degradation
gru00310  Lysine degradation
gru00380  Tryptophan metabolism
gru00620  Pyruvate metabolism
gru00630  Glyoxylate and dicarboxylate metabolism
gru00640  Propanoate metabolism
gru00670  One carbon pool by folate
gru00785  Lipoic acid metabolism
gru01100  Metabolic pathways
gru01110  Biosynthesis of secondary metabolites
gru01120  Microbial metabolism in diverse environments
gru01200  Carbon metabolism
gru01210  2-Oxocarboxylic acid metabolism
gru01240  Biosynthesis of cofactors
Module
gru_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gru_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gru_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gru_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GCWB2_03460 (lpdC)
   00020 Citrate cycle (TCA cycle)
    GCWB2_03460 (lpdC)
   00620 Pyruvate metabolism
    GCWB2_03460 (lpdC)
   00630 Glyoxylate and dicarboxylate metabolism
    GCWB2_03460 (lpdC)
   00640 Propanoate metabolism
    GCWB2_03460 (lpdC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GCWB2_03460 (lpdC)
   00280 Valine, leucine and isoleucine degradation
    GCWB2_03460 (lpdC)
   00310 Lysine degradation
    GCWB2_03460 (lpdC)
   00380 Tryptophan metabolism
    GCWB2_03460 (lpdC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GCWB2_03460 (lpdC)
   00670 One carbon pool by folate
    GCWB2_03460 (lpdC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gru04147]
    GCWB2_03460 (lpdC)
Enzymes [BR:gru01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GCWB2_03460 (lpdC)
Exosome [BR:gru04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GCWB2_03460 (lpdC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA NAD_binding_8 HI0933_like FAD_binding_3 FAD_binding_2 FAD_oxidored Thi4 3HCDH_N DAO ApbA Amino_oxidase Pam3_gp59 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: ASR01519
LinkDB
Position
747993..749387
AA seq 464 aa
MAVVAEHFQTVVLGAGPGGYVAAIRSAQLGMKTAVIEEKYWGGVCLNVGCIPSKALLRNA
ELAHIFNHQAKTFGMSGDVSFDFGAAFDRSRKVSDGIVKGVHYLMKKNKITEIDGYGVFT
DAKTITVGDREITFDNVIIDTGSTVKLLPGVELSENVVTYETQILTRELPESIVIVGAGA
IGMEFGYVMANYGVDVTIVEFLDRVLPNEDADSSKAVAKEYKKLGVKLLTSTKVQSVTDK
GDSVTVTYKDAKGSEGELTVDKVLMSVGFAPRVEGFGLEKTGVELTDRGAIAIDDYMRTN
VEGIYAIGDVTAKLQLAHVAEAQGVVAAETIAGEETMTLGDYRFMPRATFCQPQVASFGL
TEAQAKDEGYNVKATTFPFSANGKAQGLGETAGFAKLVTDADTDELLGGHLVGDNVSEML
PEMTLAHKWDLTAKELARNVHTHPTMSEALQETFHGAIGHMINL
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtggctgtcgtggctgaacactttcaaacagttgtattgggtgcaggtccaggtgggtat
gtagccgcgatccggtcggctcaactgggcatgaaaaccgccgtcatcgaggagaagtac
tggggcggtgtatgtctcaacgtcggatgtatcccgtccaaggcgttgctgcggaacgcg
gagctcgcgcacatcttcaaccaccaggccaagacgttcggcatgagtggtgacgtgtcc
ttcgacttcggcgcggcgttcgaccgcagccgcaaggtctcggacggcatcgtcaagggc
gtccactatctgatgaaaaagaacaagatcaccgagatcgacggctatggcgtcttcacc
gatgccaaaaccatcaccgtgggcgatcgcgagatcaccttcgacaacgtcatcatcgac
accggctcgaccgtgaagctgctgccgggcgtcgaactgtcggagaacgtggtcacctac
gagacccagatcctcacccgtgaactgcccgagtccattgtcatcgtcggcgcgggcgcc
atcggtatggagttcggctacgtgatggccaactacggcgtcgacgtcaccatcgtcgag
ttcctcgaccgcgtcctgcccaacgaggacgccgactcgtcgaaggccgtcgccaaggaa
tacaagaagctcggcgtcaagctgctgacctccaccaaggtgcagtccgtcaccgacaag
ggcgacagcgtcaccgtcacctacaaggatgcgaagggctccgaaggcgagctgaccgtc
gacaaggtcctcatgtccgtgggcttcgccccgcgcgtcgagggcttcggtctcgagaag
accggtgtcgagctcaccgaccgcggcgccatcgcgatcgacgactacatgcggaccaac
gtcgagggcatctacgccatcggtgacgtgaccgccaagctgcagctcgcgcacgtcgcc
gaggctcagggtgtcgtcgccgcggagaccatcgcgggcgaggagaccatgacgctgggc
gactaccgcttcatgccgcgcgccaccttctgccagccgcaggtcgcctcgttcggcctc
accgaggcgcaggccaaggacgagggttacaacgtgaaggccaccacgttcccgttcagc
gccaacggcaaggcgcagggcctcggcgagaccgccggcttcgccaagctggtcaccgac
gccgacaccgacgaactgctcggcggtcacctggtgggcgacaacgtctccgagatgctc
ccggagatgaccctggcccacaagtgggacctcaccgccaaagaactggcccgcaatgtg
cacacccacccgaccatgtcggaggcgctgcaggagacgttccacggcgcgatcgggcac
atgatcaacctgtag

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