Gordonia rubripertincta: GCWB2_05825
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Entry
GCWB2_05825 CDS
T05629
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCWB2_05825
09124 Replication and repair
03420 Nucleotide excision repair
GCWB2_05825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gru03021
]
GCWB2_05825
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_05825
Enzymes [BR:
gru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCWB2_05825
Transcription machinery [BR:
gru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCWB2_05825
DNA repair and recombination proteins [BR:
gru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCWB2_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
ASR01982
UniProt:
A0AAW6RDM1
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All DBs
Position
complement(1264419..1266098)
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AA seq
559 aa
AA seq
DB search
MERVTDGPLIVQSDKTLLLEVDHPDAQAARQAIAPFAELERAPEHVHTYRVTPLALWNAR
AAGHDAEQVVDALVTYSRYAVPQPLLMDVVDTMGRFGRLQLVKHPAHGLTLVSLDRAVLL
EVMRHKKVAPMLGAQIDDDTVIVHPSERGRLKQVLLKVGWPAEDLAGYVDGEAHPIDLDQ
GDWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQW
KRELIARTTLTEEEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIY
DEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGW
IAPAECIEVRVTLTDEERLQYAVAEPEEKYKLCSTAHTKVNVVKAILNKHQGQQTLVIGA
YIDQLEELGRELDCPVIQGSTKNKEREILFDRFRSGELQTLVVSKVANFSIDLPEASVAV
QVSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDADYAAHRQRFLAEQGYAYR
ITDADDLLGPTIGDPTSAD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgaccgatggacccctgatcgtgcaatccgacaagaccctgctgctcgag
gtcgaccaccccgacgcgcaggcggctcgtcaggcgatcgcacctttcgccgaactcgaa
cgtgcccccgagcacgtccacacctaccgggtcaccccgctcgcactgtggaacgcccgc
gccgccggtcacgacgccgaacaggtcgtcgacgcgctggtcacctactcgcgctacgcc
gtcccccagccgctgctgatggacgtcgtcgacacgatgggccgcttcggccggctgcag
ctggtcaagcatcccgcacacggactgaccctcgtcagcctcgaccgtgccgtgctgctc
gaggtcatgcggcacaagaaggtcgccccgatgctcggtgcacagatcgacgacgacacc
gtcatcgtgcatccgtccgagcgcggtcgcctcaagcaggtgctgctgaaggtcggctgg
ccggccgaggacctcgccgggtacgtcgacggcgaggcgcaccccatcgacctggaccag
ggcgactggcacctgcgcgactaccaggagatggcggccgactcgttctgggcgggcggt
tccggcgtcgtcgtgctgccgtgtggtgcgggcaagacgatggtcggcgcggccgcgatg
gccaaggccggtgccaccaccctgatcctggtcaccaacaccgtcgccggccgccagtgg
aagcgcgagctcatcgcgcgcaccacgctgaccgaggaggagatcggcgagtactccggc
gaacgcaaggagatccgcccggtcaccatcgcgacctatcaggtcatgacgcgaaagtcg
aagggcgagtaccggaatctcgatctcttcgactcccgcgactggggcctgatcatctac
gacgaggtgcacctgctgcccgcaccggtcttccggatgaccgccgacctacagtcacga
cgacgcctcggcctcaccgcgacgctcgtccgcgaggacggccgcgagggtgacgtcttc
tcgctcatcggccccaagcggtacgacgccccgtggaaggacatcgaggcacagggttgg
atcgcaccggccgagtgcatcgaggtccgtgtgaccctcaccgacgaggagcgcctgcag
tacgcggtcgccgagccggaggagaagtacaagctctgctccaccgcgcacaccaaggtc
aacgtggtgaaggcgatcctgaacaagcaccagggtcagcagacgctggtcatcggcgcc
tacatcgaccagctcgaggagctcggccgcgaactcgactgcccggtcatccaggggtcg
acgaagaacaaggagcgcgagatcctgttcgaccgcttccggtccggcgagctgcagacc
ctcgtcgtgtcgaaggtcgccaacttctccatcgaccttccggaggcatccgtcgccgtc
caggtgtcaggcaccttcggttcgcgccaggaggaggcccagcgcctcggtcgcctgctg
cggccgaaacatgatggcggtcaggcccatttctactcggtcgtctcgcgcgacaccctc
gacgccgactacgccgcccaccggcagcgtttcctcgccgagcagggttacgcctaccgc
atcaccgacgccgacgacctcctgggtccgaccatcggggaccccacctcggcggactga
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