Gordonia rubripertincta: GCWB2_06525
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Entry
GCWB2_06525 CDS
T05629
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_06525 (phrA)
Enzymes [BR:
gru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GCWB2_06525 (phrA)
DNA repair and recombination proteins [BR:
gru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GCWB2_06525 (phrA)
Prokaryotic type
GCWB2_06525 (phrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASR02121
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All DBs
Position
1411275..1412561
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AA seq
428 aa
AA seq
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MWLRRDLRLSDLPALSTARGTDDSSVLLCFVVDPRLEKSSGERRLAFLFDSLRDVDAKLD
GKLLVVRGRPDEEIPRLAKAVNAEAVHISGDFTPFGRHRDEAVAEALGDIPLEATGSPYL
VSPGRIAKGDGEPYKVFTPYFRRWREHGWRKPADSSIPGSAVLDPSGVKKSGRIKIPTAP
TTLSFPAGEDAALARWAEFVDDDLADYDTGRNDPAADVTSRMSAYLKYGNIHPRTLAADL
GKGDGPQAYLRELAFRDFYADVLFHWPHSLWHNWNRQFDDIELDTDAAAYERFEAWKAGR
TGFPLVDAGMRQLAETGWMHNRVRMVTASFLVKDLHLPWWWGAEWFLDQLVDGDMASNNH
GWQWAAGTGTDAAPYFRVFNPEAQAKKFDPKGEYVRRWVGDVDADDYPEPIVDHKAEREE
ALRRFGAI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgtggctcagacgcgacctgcgtctgagcgacctaccagcactatcgacagccagaggg
accgacgattcgtcggtccttctgtgctttgtggtggatcctcggctcgagaagtcatcg
ggggagcggcgactcgctttcctcttcgattcgctccgcgacgtcgacgccaagctcgac
gggaagttgctcgtcgtgcggggccgtcccgacgaggagatcccgcgactcgcgaaggcc
gtgaacgccgaggccgtccacatctccggggacttcaccccgttcggccgacaccgtgac
gaggccgtcgccgaggcgctcggcgacatcccgttggaggccaccggctcgccgtacctg
gtctcacccggtcggatcgccaagggcgacggcgaaccgtacaaggtgttcaccccgtac
ttccgccggtggcgtgaacacgggtggcgtaaaccggccgattcctcgatcccgggttcg
gcagtcctcgacccgtcaggggtgaagaagtccggccggatcaagatcccgacggcgccg
acgaccctttctttccccgccggtgaggacgctgcgctggcccggtgggccgaattcgtc
gacgacgatctcgccgactacgacaccggccgcaacgacccggccgccgacgtcaccagc
cggatgtcggcctacttgaagtacggcaacatccacccgcgcacgctcgccgccgatctc
ggcaaaggcgatgggccgcaggcatatctacgtgaactcgccttccgcgacttctacgcc
gatgtactcttccactggccacacagcttgtggcacaactggaatcggcagttcgacgac
atcgaactggacaccgacgccgcggcctacgagcgattcgaggcgtggaaggccggccgc
accgggttcccgctcgtcgacgccgggatgcggcagctcgccgagacgggttggatgcac
aaccgggtccgcatggtcaccgcgtcgttcctggtgaaggacctccacctgccgtggtgg
tggggtgcggagtggttcctcgaccaactcgtcgacggcgacatggcgtcgaacaaccat
gggtggcagtgggcggccggcaccggtaccgatgcggcgccgtacttccgggtgttcaac
ccggaagcgcaggccaagaagttcgatcccaagggggagtacgtccgacgctgggtaggc
gacgtcgacgccgacgactacccggaacccatcgtcgaccacaaagccgaacgcgaggaa
gcgcttcgacggttcggtgcgatctag
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