KEGG   Gordonia rubripertincta: GCWB2_06740
Entry
GCWB2_06740       CDS       T05629                                 
Symbol
fpg1
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gru  Gordonia rubripertincta
Pathway
gru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GCWB2_06740 (fpg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gru03400]
    GCWB2_06740 (fpg1)
Enzymes [BR:gru01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GCWB2_06740 (fpg1)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GCWB2_06740 (fpg1)
DNA repair and recombination proteins [BR:gru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GCWB2_06740 (fpg1)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N Zn_ribbon_TFIIB TMEM106_N
Other DBs
NCBI-ProteinID: ASR02160
LinkDB
Position
1460992..1461897
AA seq 301 aa
MPELPEVAAIADYVDGRAAGLPIRRVDVASLSVLKTADPPYTALTGRIVESVGRVGKYLV
IRTIPGQNQDNPPATASEPELSLVIHLSRAGWVRWSEDLSPKPLRPGGKSPIALRVHCGL
PGEGFDVTEAGTQKRLAVWLVRDLTEIDRVAGLGPDALELTEEKFAEILAGTTGRVKNVL
TDQHTIAGIGNAYSDEILHTARLSPFASSKTLKPDQVSALYDAMRAVLTDATGRLEGQTV
ARLKSEKRTGLRVHARTGLPCPVCGDTVREVSFADRSFQYCPTCQTGGKVLADRRMSRLL
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcccgagctccctgaggtggccgccatcgccgactatgtcgacggtcgcgcggccgga
ctcccgatccggcgagtcgacgtcgcgtccttgtccgtgctcaagacggccgacccgccg
tacaccgcgctcaccggccggatcgtcgaatcggtcggccgggtgggcaaatacctggtc
atccggaccatccccggccagaaccaggacaatcctccggcgaccgcatccgaacccgag
ctgtcgctggtcatccacctgtcgagggcgggctgggtgcgatggagcgaggacctctca
cccaagccgctacgcccgggcggcaagtcgccgatcgcgctgcgggtgcactgcgggcta
cctggcgagggcttcgacgtcaccgaggccggaacccagaagcggctggcggtgtggctc
gtccgcgacctcaccgagatcgaccgcgtcgccgggctcggccccgacgccctggaactg
accgaggaaaaattcgccgagatcctcgccggtaccaccggacgtgtgaagaacgtgctc
accgaccagcacaccatcgccgggatcggcaacgcctactccgacgagatcctgcacacc
gcgcgactgtcgccgttcgcatcgtcgaagaccctgaaacccgatcaggtgagcgccctg
tacgacgcgatgcgcgccgtgctcaccgacgccacggggcgtctcgaagggcagaccgtc
gcccggttgaagtcggagaaacgcaccggactccgcgtgcacgcgcgcaccggactgccg
tgtccggtctgcggcgacaccgtccgcgaggtgtccttcgccgaccggtccttccagtac
tgcccgacctgccagaccggtggcaaggtcctcgccgaccgccggatgtcgcggcttctg
aaatga

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