Gordonia rubripertincta: GCWB2_06925
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Entry
GCWB2_06925 CDS
T05629
Symbol
fadD1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00061
Fatty acid biosynthesis
gru00071
Fatty acid degradation
gru01100
Metabolic pathways
gru01212
Fatty acid metabolism
gru02024
Quorum sensing
gru04146
Peroxisome
Module
gru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCWB2_06925 (fadD1)
00071 Fatty acid degradation
GCWB2_06925 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GCWB2_06925 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCWB2_06925 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gru01004
]
GCWB2_06925 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gru04147
]
GCWB2_06925 (fadD1)
Enzymes [BR:
gru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCWB2_06925 (fadD1)
Lipid biosynthesis proteins [BR:
gru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GCWB2_06925 (fadD1)
Exosome [BR:
gru04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCWB2_06925 (fadD1)
Exosomal proteins of breast cancer cells
GCWB2_06925 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ASR02197
LinkDB
All DBs
Position
1498802..1500463
Genome browser
AA seq
553 aa
AA seq
DB search
MSVYDDKVWRSHYREQDLAPRSIEFDTALDMFAATAARTPDADLIRYFDGSVTAGELDEL
TDAFAVGILDLGFAPGDRAVVYAQNIPQFVIAQLGIWKAGGIAVSANPMYRSRELAEILV
DSGATVLVAMQSLYRDVAQEALRDNKTAVRTVITTSELEYQTANSGTLAGVEKIDCPDTV
DLATMLAKYRGRRPPKADLTGDSVAFLTYTSGTTGPPKGAMTTHRNVVFNAQTYRDWVGV
DSDDVILGVAPLFHITGLIAHIALAELTGAPLVLMYRMDPADTIATIAREKATFTVGSIT
VFIALMNVPDIDPASLASLSKIYSGGAPIPPSTIAEFQKRFGHYIHNVYGLTETTSPSHA
VPFGVTAPADEETGATSVGIPVYDTVVRIVDEQGNDLPAGEVGELVTAGPQVVAGYWNKP
EATAKGIPNGVLHTGDVGYMDADGWFYIVDRKKDQINTSGFKVWPREVEDVLYEHPSVRE
AAVVGVPDAYRGETVKAFVSLRPGTEATPEELIDHCKTRMAAYKYPREVVVMGDIPKTAT
GKLLRRELRTVAQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctacgacgacaaggtgtggcgcagccactaccgcgagcaggatctcgcgccg
cggagcatcgaattcgacaccgcgctggacatgttcgcggccactgccgcgcgcaccccg
gatgccgacctgatccgttacttcgacggatcggtcaccgccggggagctcgacgagctg
accgacgcgttcgcggtcggcatcctggacctgggcttcgccccgggcgatcgcgcggtg
gtctacgcccagaacatcccgcagttcgtcatcgcccagctgggtatctggaaggccggc
ggcatcgccgtctcggccaacccgatgtaccgcagtcgcgaactcgccgagatcctcgtc
gattccggcgccacggtactggtcgcgatgcagtcgctgtaccgggacgtcgcgcaggag
gcgttgcgcgacaacaagaccgcggtgcggaccgtgatcaccacctcggagctggagtac
cagaccgcgaacagcggaacactggcgggcgtcgagaagatcgactgcccggacaccgtc
gacctggcgacgatgctcgcgaagtaccgcggccggcgtccgccgaaggctgatctcacc
ggggacagcgtcgccttcctgacctacacgtcgggaaccaccgggccgcccaagggtgcc
atgaccacccatcgcaacgtcgtgttcaacgcgcagacctaccgcgactgggtcggtgtc
gacagcgacgacgtgatcctcggcgtggcaccgctgttccacatcaccggtctcatcgcg
cacatcgcgctggccgaactcaccggggctccgctggtgctgatgtaccggatggacccg
gccgacaccatcgcgacgatcgcgcgcgagaaggcgacgttcacggtcggatcgatcacg
gtgttcatcgccctgatgaacgtgccggacatcgacccggcgtcgctggcgagtctgtcg
aagatctactccggcggcgcgccgatcccgccgagcacgatcgccgagttccagaaacgg
ttcggtcactacatccacaacgtgtacggcctgaccgagaccacctccccgtcgcatgcg
gtgccgttcggcgtgacggccccggccgacgaggagaccggggccacctcggtgggaatc
ccggtgtacgacacagtcgtccggatcgtcgacgaacagggcaacgacctgcccgcgggc
gaggtcggcgagctggtcacggccggcccacaggtggtcgccggctactggaacaagccg
gaggcgaccgcgaagggcatcccgaacggcgtgctgcacaccggcgacgtcggttacatg
gacgccgacggatggttctacatcgtcgaccggaagaaggaccagatcaacaccagcggt
ttcaaggtgtggccacgcgaggtcgaagacgttctgtacgagcatccttcggtgcgggaa
gcagcggtcgtcggcgtgcccgacgcctaccgcggcgagaccgtgaaggcgttcgtgagc
ctgcggccgggaaccgaggcgacgccggaagagttgatcgaccactgcaagacgcggatg
gctgcctacaagtacccgcgtgaggtcgtcgtgatgggtgacatcccgaagaccgccacg
ggcaagctgttgcgtcgtgaactgcggacggtggcacagtga
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