Gordonia rubripertincta: GCWB2_08170
Help
Entry
GCWB2_08170 CDS
T05629
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gru03000
]
GCWB2_08170 (gabR)
Transcription factors [BR:
gru03000
]
Prokaryotic type
Helix-turn-helix
GntR family
GCWB2_08170 (gabR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_Crp_2
HTH_24
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ASR02443
LinkDB
All DBs
Position
complement(1766042..1767541)
Genome browser
AA seq
499 aa
AA seq
DB search
MEENRVNRDAAPPDPWAEVAARLGADLFLDLQPDPEASARGRGATLRRTLIEALRSAILD
GRLPAGTALPPYRSLAADLGLARGTVSAVYQELIAEGWLTARQGSATRVAEGAAHPDAAG
GRDDERPSTHSTFRFPHDFSLGQPCAGMFPRTDWIRATRRVLTVVGDDVFAPAHPQGRPE
LRHALSAYLGRTRGVRTNADRMILGTAVQSALEMLSRTVFGDTLAVESHGLPFHWRAVER
GGTRVIPIPVDDEGMVIDDLERSGAPAVLLSPSHQFPTGVALSPARRMQVIEWARRTGAI
IVEDDYDGEFRYDRDPVGALQALGPDVVVHAGSMSKSLSPAVRAGWLALPPHLVDVVLGA
KGVREGDAGIIDQLILADLIDSGAYDRHIRRSRQVYRQRRDALVEAVTACGFGLPGIAAG
LHAVIPVDHADEGLLVHEAFRRGIGLVGLSLFRHPDADPLPCGGLVVGFGTPAASTFTAD
LQALRDLLAESSTARRVVP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacagggtcaatcgcgacgctgcccctcctgacccgtgggcggaggtggcc
gcgcgcctcggtgccgatctgtttctcgacctgcagccggaccccgaggcgagcgcacgc
gggcgcggtgcgacgctgcgtcgaacgctcatcgaggcgctgcgatcggcgatactcgac
gggcgcctccccgccggcaccgccctaccgccgtaccgttcgctcgccgccgacctcggc
ctggcacgcggcaccgtgtcggcggtctatcaggagttgatcgccgaaggctggctgacc
gcgcgtcagggttcggccacacgcgtggccgagggcgcggcacaccccgatgccgccggc
ggacgggacgatgaacgcccgtcgacgcactcgactttccgtttcccgcacgacttctca
ctcggacagccgtgcgcgggcatgttcccgcgcacggactggatccgcgctacccgccgc
gtcctcacggtcgtcggcgacgatgtgttcgcccccgcacatccgcagggccgcccggaa
ctccgccacgccctgagcgcatacctgggccggacccgcggcgtccgcacgaacgccgat
cggatgatcctcgggaccgcggtacagtccgcgctggagatgctgtcgcgcaccgtcttc
ggcgacaccctggcagtcgagagccacggcctgcccttccactggcgggccgtcgaacgc
ggcggcacccgggtgatcccgatccccgtcgacgacgaggggatggtgatcgacgatctc
gaacgcagcggcgccccggccgtcctgctctcgccgagccatcagttcccgaccggggtc
gcactgtccccggcgcggcgtatgcaggtcatcgagtgggcccggcggaccggggcgatc
atcgtcgaggacgactacgacggcgagttccggtacgaccgcgatccggtcggcgccctg
caggcactcggcccggatgtggtggtccacgccgggtcgatgtccaagagcctctccccc
gccgtgcgcgccgggtggctcgccctgccaccccatctggtggatgtcgttctgggcgcc
aagggagtacgcgaaggcgacgccggcatcatcgaccagctgatcctcgccgacctgatc
gattccggcgcgtatgaccggcacatccgccgcagccggcaggtgtatcgccaacgccgc
gacgcacttgtcgaggccgtcaccgcatgcggtttcgggctacccggcatcgccgccgga
ctgcacgccgtcatccccgtcgaccacgccgacgaaggactgctcgttcacgaggcgttc
cggcgagggatcggactcgtcggattgtccctgttccggcacccggacgccgatcctctg
ccgtgcggcggcctggtcgtcgggttcggaacacccgcggcgtcgaccttcaccgccgac
ctgcaggcccttcgcgacctacttgccgaatcgtctactgcgcgccgagtagtcccgtag
DBGET
integrated database retrieval system
