Gordonia rubripertincta: GCWB2_08725
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Entry
GCWB2_08725 CDS
T05629
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00020
Citrate cycle (TCA cycle)
gru00190
Oxidative phosphorylation
gru00650
Butanoate metabolism
gru00720
Other carbon fixation pathways
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01120
Microbial metabolism in diverse environments
gru01200
Carbon metabolism
Module
gru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gru_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GCWB2_08725 (sdhB)
00650 Butanoate metabolism
GCWB2_08725 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GCWB2_08725 (sdhB)
00720 Other carbon fixation pathways
GCWB2_08725 (sdhB)
Enzymes [BR:
gru01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GCWB2_08725 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_7
Fer4_18
Fer4_2
Fer4
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
ASR02554
UniProt:
A0AAW6R5V1
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All DBs
Position
complement(1887453..1888241)
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AA seq
262 aa
AA seq
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MTSVLDKPAPSSDEPPLPPVPEEATMVTLKIFRFNPENPDAQGFESFRVPALPTDRLLNL
LLYVKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKLLMKDMLPKDKSKEITITVEP
IRGLPVEKDLVVNMEPFFDAYRAIKPFLITSGNEPTRERIQSQSDRARFDDTTKCILCAC
CTTSCPVFWTEGSYFGPAAIVNAHRFIFDSRDEGAVERLDILNDVDGVWRCRTTFNCTDA
CPRGIQVTQAISEVKRALMFSR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgttctggacaagcccgcaccctcctccgacgagccgccgctgcccccggtg
cccgaagaggccaccatggtcacgctgaagatcttccggttcaacccggagaatcccgat
gcccagggcttcgagagcttccgcgtcccggcgctgccgaccgaccggttgctcaacctc
ctgctgtacgtgaagggctacctcgacggcaccctgacgttccgccgcagctgtgcacac
ggcgtgtgcggttccgacgccatgcgcatcaacggcgtcaaccgcctggcctgcaagctc
ctcatgaaggacatgctccccaaggacaagtccaaggagatcaccatcaccgtcgagccg
atccgcggcctgccggtggagaaggatctcgtcgtgaacatggagccgttcttcgacgcg
taccgcgcgatcaagccgttcctgatcacctcgggcaacgagccgacccgtgagcgcatc
cagagccagagcgaccgcgcccgcttcgacgacaccaccaagtgcatcctctgtgcgtgc
tgcaccacgagctgcccggtgttctggaccgagggttcctacttcggcccggccgcgatc
gtcaacgcgcaccgcttcatcttcgacagccgtgacgagggcgccgtcgagcgtctcgac
atcctcaacgacgtcgacggtgtgtggcgctgccgcacgaccttcaactgcaccgacgca
tgcccccggggcatccaggtcacgcaggcgatctcggaggtcaagcgcgcactcatgttc
tcgcgctag
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