Gordonia rubripertincta: GCWB2_08910
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Entry
GCWB2_08910 CDS
T05629
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00020
Citrate cycle (TCA cycle)
gru00620
Pyruvate metabolism
gru00720
Other carbon fixation pathways
gru01100
Metabolic pathways
gru01120
Microbial metabolism in diverse environments
gru01200
Carbon metabolism
gru01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GCWB2_08910 (cfiB)
00620 Pyruvate metabolism
GCWB2_08910 (cfiB)
09102 Energy metabolism
00720 Other carbon fixation pathways
GCWB2_08910 (cfiB)
Enzymes [BR:
gru01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
GCWB2_08910 (cfiB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BSH_RND
RnfC_N
ATP-grasp_3
GCV_H
BSH_ALG44
BSH_YhbJ
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ASR02591
LinkDB
All DBs
Position
1930761..1934150
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AA seq
1129 aa
AA seq
DB search
MFDKVLVANRGEIAIRAFRAAYELGARTVAVYPYEDRNSVHRLKADESYQIGLPGHPVRA
YLSVEEVVSAAVRCGADAIYPGYGFLSENQGLAAACAEAGITFVGPSADILEMTGNKATA
VAAAKAAGIPVLASSEPSSDLDELLAAAEDMHFPVFVKAVAGGGGRGMRRVDDRGDLAEA
IAAASREAESAFGDATVFLEQAVVNPRHIEVQILADTHGNVIHLYERDCSLQRRHQKVIE
LAPAPNLSDELREKICADAVAFARHIGYTCAGTVEFLLDEQGRHVFIEMNPRIQVEHTVT
EEITDVDLVSSQLRIAAGESLDDLGLSQESIRIRGAALQCRITTEDPSNGFRPDVGRITA
YRSPGGAGVRLDGGANLGAEVSGHFDSMLVKLTCRGRDFPTAVRRARRAVAEFRIRGVAT
NIPFLQAVLDDADFRDGRVTTSFIDERPGLLTQRVSADRGTKILSYLAEVTVNKPHGERP
TTVYPRDKLPTVERAVLASPKDGSRQRLLQLGPEGFARDLRESPRLGITDTTFRDAHQSL
LATRVRTTGLVNVAPYVAALTPELLSVECWGGATYDVALRFLKEDPWDRLAQLREAMPNI
CLQMLLRGANTVGYTPYPTKVTTAFVEEATDVGIDIFRIFDALNNIDAMRPAIDAVRETG
TAVAEVAMSYTGDLSSPSEDLYTLDYYLRLAEQIVEAGAHVLAIKDMAGLLRAPAATKLV
TALRKNFDLPIHVHTHDTPGGQLATYMAAWQAGADAVDGASAALAGTTSQPPLSAIVAAT
ANTDRDSGIDLARVCDLEPYWEALRKVYAPFESGLPAPTGRVYSHEIPGGQLSNLRQQAI
SLGLGNRFEAVEQAYAAADSMLGRLVKVTPSSKVVGDLALALVGRGITASDFAADPGSYD
IPDSVIGFLRGELGDPPGGWPEPLRSLALEGRAPAPEVKQLTADDEAILDKPGRDRQVRL
NHLLFPGPAKEFEEHYETYGDTSRLSANQFFYGLRYGEEHRVNLEPGVELMIGLEAISEP
DEKGMRTVMCVLNGQLRPIAVRDHSIDSAVASAEKADRANPKHVGAPFAGVVSLSVDVGD
EVAVGATIGTIEAMKMEAAITAPVAGKVTRVAISSVTQVSPGDLLVEIS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaggttctggttgccaaccggggtgagatcgcgatccgcgcgttccgcgcc
gcttatgagttgggggcgcgcacggtcgcggtgtatccgtatgaggaccgcaactcggtt
catcgcctgaaggctgatgagtcgtaccagatcggcttgccggggcatcccgtgcgcgcg
tacctctcggtcgaggaggtggtttctgctgccgtgcgatgcggcgccgacgcgatctac
cccggttatggtttcctgtcggagaatcagggcctggctgcggcctgtgccgaggccggt
atcaccttcgtcgggcccagcgccgacatcttggagatgaccggcaacaaggccaccgcg
gtggctgcggcgaaggctgcggggattccggtgctggcgtcgtcggagccgtcgtcggat
ctcgacgaactgctcgccgccgccgaggacatgcactttccggttttcgtgaaggcggtc
gccggtggtggtggtcgcggtatgcgtcgggtcgacgatcgtggggacctggccgaggcg
atcgcggcggcatcgcgtgaggcggagtcggcgttcggcgatgcgacggtgttcctcgag
caggcggtggtcaacccgcgccacatcgaggtgcagatcctcgccgacacccacggcaac
gtgatccacctgtatgagcgtgactgcagcttgcagcgtcgtcatcagaaggtcatcgag
ctcgcgccggccccgaacctctcggatgagttgcgggagaagatctgtgccgacgcggtg
gcctttgcccgtcatatcggttacacctgcgctgggacggtggagttcctcctcgacgag
caggggcgccacgtgttcatcgagatgaacccgcgtatccaggtcgagcacacggtgacc
gaggagatcaccgacgtcgatctggtgagttcgcagctgcggatcgcggcgggggagtcc
ctcgatgatctgggtttgtcgcaggagtccatccgtattcgcggtgccgcgttgcagtgc
cgcatcaccaccgaggacccgtcgaacggtttccgtccggatgtgggtcggatcaccgcc
tatcgcagccctggcggcgcgggtgtccgcctcgacggtggcgcgaacctcggtgccgag
gtgagtggtcacttcgactcgatgttggtcaagttgacctgtcgtggacgggatttcccg
accgcggtgcgtcgggcccggcgcgcggtggccgagttccgcatccgtggtgtggcgacc
aacattccgttcctgcaggccgtgctcgacgatgcggacttccgcgacggtcgggtgacc
acttcgttcatcgatgagcggccgggtctgttgacccagcgtgtgtcggctgaccgcggt
accaagatcctgtcgtacctggccgaggtgacggtcaacaagccgcacggcgagcggccg
accacggtgtacccgcgtgacaagctgcccaccgtcgagcgcgccgtgctcgcatcgccg
aaagacggttcgcggcagcgtcttctgcagctcgggccggaagggttcgctcgtgatctg
cgggagagtccgcgtctgggcatcaccgacaccaccttccgtgatgctcatcagtcgctg
ttggcgacgcgcgtgcgtaccaccggtctggtcaacgtggctccgtacgtcgcggcgttg
acgccggagttgttgtcggtggagtgctggggcggtgcgacttatgatgtggcgctgcgc
tttctgaaggaagacccgtgggatcggttggcgcagttgcgtgaggcgatgcccaacatc
tgcctgcagatgttgctgcgcggcgccaacaccgtcgggtacacgccgtacccgaccaag
gtcaccacggcttttgtcgaagaggccaccgacgtcggtatcgacatcttccggatcttc
gacgcgctcaacaacatcgacgcgatgcgtccggcgatcgacgcggtccgtgagacgggg
accgcggtggccgaggtggcgatgagctacaccggtgacctgtcgtcgccgtcggaggat
ctctacaccctcgactactacctgcgtctggccgagcagatcgttgaggcgggtgcacac
gtgctggcgatcaaggatatggccggtctgttgcgggccccggcggcgaccaagctggtc
acggcgctgcgtaagaacttcgacctgccgatccacgtgcacacccacgacaccccgggt
ggccagctcgccacgtacatggcggcctggcaggccggtgcggatgcggtggacggtgcg
agtgcggcgctggccggcacgaccagtcagcccccgctgtcggcgatcgtggcggcgacg
gcgaacaccgaccgcgacagtggcatcgacctggcccgggtttgcgacctcgagccgtac
tgggaggcgctgcgcaaggtgtacgcgccgttcgagtccgggctgccggctccgaccggt
cgggtgtactcccacgagatcccgggcggtcagttgtcgaacctgcgtcagcaggccatc
tcgctgggtctgggtaaccgcttcgaggccgtcgagcaggcctacgccgccgccgattcg
atgctgggtcgtctggtcaaggtgacgccgtcgtcgaaggtcgtcggtgacctggcgctg
gctttggtcggtcgcgggatcaccgcctcggacttcgctgccgacccgggttcctatgac
atcccggactcggtgatcgggttcctgcgtggcgaactcggtgatccgcccggtggctgg
ccggagccgctgcgcagcctcgcgctcgagggtcgggcaccggcgccggaggtcaagcag
ctgaccgccgacgacgaggcgatcctggacaagcccggccgtgatcgtcaggtgcgtctg
aaccatctgttgttccccgggcccgccaaggagttcgaggagcactacgagacctacggc
gacacctcgcggttgtcggcgaaccagttcttctacggtctgcgttacggcgaggaacat
cgcgtcaacctcgagcccggcgtcgagttgatgatcggtctcgaggccatcagcgagccc
gacgagaagggcatgcgcaccgtgatgtgtgtgctcaacggtcaactgcgtccgatcgcg
gtccgcgaccacagcatcgactccgcggtcgccagcgccgagaaggccgatcgggccaac
ccgaagcacgtcggggcgccgttcgccggcgtggtctccctgtcggtcgacgtgggtgac
gaggtcgccgtcggcgcgacgatcggcaccatcgaggcgatgaagatggaagcggccatc
accgcacccgtcgccggcaaggtcacccgcgtcgcgatcagctcggtcacccaggtgtcg
ccgggtgacctgctcgtcgagatcagctga
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