Gordonia rubripertincta: GCWB2_09320
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Entry
GCWB2_09320 CDS
T05629
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00300
Lysine biosynthesis
gru00470
D-Amino acid metabolism
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01120
Microbial metabolism in diverse environments
gru01230
Biosynthesis of amino acids
Module
gru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCWB2_09320 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCWB2_09320 (lysA)
Enzymes [BR:
gru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GCWB2_09320 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASR02672
UniProt:
A0AAW4G348
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All DBs
Position
2020403..2021824
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AA seq
473 aa
AA seq
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MSAHPAGPRHAELLAAPHLAQRPNDPAVLAALPPQVWPRNAARDESGELRIAGVPVNELA
AEFGTPAFIVDEADFRSRCRDMMAAFGPYGRVHYASKAFLCSEVARWVNEEGLSLDVCSG
GELAIALRAGFPAARIALHGNNKSPEELAAAVDAGIGHVVLDSMIEIDRLDAISGERGVV
TDVLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMEAIRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLHDVVDEFGVEKTSQMSIVDLGGGLGISYLEEERPLPVGKV
AETLADIVRRESAAVGLPMPIIAVEPGRAIAGPGTITLYRVGTVKDVALGGGATRRYISV
DGGMSDNIRTVLYQAEYDVRLVSRVSDARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVADGAARLMLRRETIDDFLSLEVGS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcacccggccggcccgcggcacgccgaactgctggccgcgccgcacctcgcg
cagcgcccgaacgacccggccgtcctcgccgccctgccgccccaggtgtggccgcgcaac
gccgcccgcgacgagtcgggtgagctgcgtatcgccggagtgccggtgaacgagctggcc
gccgagttcggcaccccggcgttcatcgtcgacgaagccgatttccggtcccgttgccgc
gacatgatggcggcgttcggcccctacggccgggtgcactacgcgtcgaaggccttcctg
tgcagcgaggtcgcgcgctgggtgaacgaagaggggctttccctcgacgtgtgcagcggc
ggcgaactcgccatcgcgctgcgcgccggcttccccgcggcacgaatcgcgttgcacggc
aacaacaagagccccgaggaactggccgcggcggtcgacgccggcatcgggcacgtggtc
ctcgactccatgatcgagatcgaccggctcgacgcgatctccggtgagcggggcgtcgtc
accgacgtgctcgtccgggtcaccgtcggcgtggaggcgcacacccacgagttcatctcg
accgcccacgaggaccagaagttcggcttcgccctcgccggcggtgtcgcgatggaggcg
atccgccgggtcttcgcgaccgacaacctccgcctcgtcggtctgcacagccacatcggt
tcgcagatcttcgacatggacggtttcgagttggccgcccaccgtgtcctcgggctgctc
cacgacgtcgtcgacgagttcggcgtcgagaagacctcgcagatgtcgatcgtggatctc
ggtgggggactgggtatctcgtacctcgaggaggagcggccgctgccggtgggcaaggta
gccgagaccctcgccgacatcgtccgccgcgaatccgccgccgtgggcctgccgatgccg
atcatcgccgtcgagcccggccgcgcgatcgccggccccggcaccatcaccctctatcgc
gtgggcaccgtcaaggacgtggcgctcggcggtggtgccacccgccgctacatctccgtg
gacggcgggatgagcgacaacatccgcacggtgctctaccaggccgaatacgacgtccgg
ctggtctcgcgggtgtccgacgcacgtgcggtcgtctgccgcgtcgtcgggaagcactgc
gagagcggtgacatcgtgatcaaggactgctggctgcccgaggacctgggtcccggtgac
ctgatcgcggtcgccgccaccggcgcctactgctactcgatgtcgagtcggtacaacatg
accatgcggccgccggtcgtggccgtggccgatggggcggcacgcctcatgctgcggcgc
gagaccatcgacgacttcctcagcctggaggtgggctcgtga
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