KEGG   Gordonia rubripertincta: GCWB2_09320
Entry
GCWB2_09320       CDS       T05629                                 
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
gru  Gordonia rubripertincta
Pathway
gru00300  Lysine biosynthesis
gru00470  D-Amino acid metabolism
gru01100  Metabolic pathways
gru01110  Biosynthesis of secondary metabolites
gru01120  Microbial metabolism in diverse environments
gru01230  Biosynthesis of amino acids
Module
gru_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GCWB2_09320 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GCWB2_09320 (lysA)
Enzymes [BR:gru01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GCWB2_09320 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ASR02672
UniProt: A0AAW4G348
LinkDB
Position
2020403..2021824
AA seq 473 aa
MSAHPAGPRHAELLAAPHLAQRPNDPAVLAALPPQVWPRNAARDESGELRIAGVPVNELA
AEFGTPAFIVDEADFRSRCRDMMAAFGPYGRVHYASKAFLCSEVARWVNEEGLSLDVCSG
GELAIALRAGFPAARIALHGNNKSPEELAAAVDAGIGHVVLDSMIEIDRLDAISGERGVV
TDVLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMEAIRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLHDVVDEFGVEKTSQMSIVDLGGGLGISYLEEERPLPVGKV
AETLADIVRRESAAVGLPMPIIAVEPGRAIAGPGTITLYRVGTVKDVALGGGATRRYISV
DGGMSDNIRTVLYQAEYDVRLVSRVSDARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVADGAARLMLRRETIDDFLSLEVGS
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtgagcgcgcacccggccggcccgcggcacgccgaactgctggccgcgccgcacctcgcg
cagcgcccgaacgacccggccgtcctcgccgccctgccgccccaggtgtggccgcgcaac
gccgcccgcgacgagtcgggtgagctgcgtatcgccggagtgccggtgaacgagctggcc
gccgagttcggcaccccggcgttcatcgtcgacgaagccgatttccggtcccgttgccgc
gacatgatggcggcgttcggcccctacggccgggtgcactacgcgtcgaaggccttcctg
tgcagcgaggtcgcgcgctgggtgaacgaagaggggctttccctcgacgtgtgcagcggc
ggcgaactcgccatcgcgctgcgcgccggcttccccgcggcacgaatcgcgttgcacggc
aacaacaagagccccgaggaactggccgcggcggtcgacgccggcatcgggcacgtggtc
ctcgactccatgatcgagatcgaccggctcgacgcgatctccggtgagcggggcgtcgtc
accgacgtgctcgtccgggtcaccgtcggcgtggaggcgcacacccacgagttcatctcg
accgcccacgaggaccagaagttcggcttcgccctcgccggcggtgtcgcgatggaggcg
atccgccgggtcttcgcgaccgacaacctccgcctcgtcggtctgcacagccacatcggt
tcgcagatcttcgacatggacggtttcgagttggccgcccaccgtgtcctcgggctgctc
cacgacgtcgtcgacgagttcggcgtcgagaagacctcgcagatgtcgatcgtggatctc
ggtgggggactgggtatctcgtacctcgaggaggagcggccgctgccggtgggcaaggta
gccgagaccctcgccgacatcgtccgccgcgaatccgccgccgtgggcctgccgatgccg
atcatcgccgtcgagcccggccgcgcgatcgccggccccggcaccatcaccctctatcgc
gtgggcaccgtcaaggacgtggcgctcggcggtggtgccacccgccgctacatctccgtg
gacggcgggatgagcgacaacatccgcacggtgctctaccaggccgaatacgacgtccgg
ctggtctcgcgggtgtccgacgcacgtgcggtcgtctgccgcgtcgtcgggaagcactgc
gagagcggtgacatcgtgatcaaggactgctggctgcccgaggacctgggtcccggtgac
ctgatcgcggtcgccgccaccggcgcctactgctactcgatgtcgagtcggtacaacatg
accatgcggccgccggtcgtggccgtggccgatggggcggcacgcctcatgctgcggcgc
gagaccatcgacgacttcctcagcctggaggtgggctcgtga

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